Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VARS2Q5ST30 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VARS2Q5ST30 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VARS2Q5ST30 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARS2Q5ST30 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARS2Q5ST30 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 TPSP2-201ENST00000561760 610 ntBASIC19.61■□□□□ 0.73
VARS2Q5ST30 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 GPR32P1-201ENST00000601788 811 ntBASIC19.61■□□□□ 0.73
VARS2Q5ST30 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARS2Q5ST30 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.61■□□□□ 0.73
VARS2Q5ST30 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARS2Q5ST30 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VARS2Q5ST30 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.6■□□□□ 0.73
VARS2Q5ST30 IGHGP-201ENST00000390555 1178 ntBASIC19.6■□□□□ 0.73
VARS2Q5ST30 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.6■□□□□ 0.73
VARS2Q5ST30 DRAXINP1-201ENST00000437611 948 ntBASIC19.6■□□□□ 0.73
VARS2Q5ST30 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
VARS2Q5ST30 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.6■□□□□ 0.73
VARS2Q5ST30 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.6■□□□□ 0.73
VARS2Q5ST30 GPALPP1-207ENST00000611650 899 ntBASIC19.6■□□□□ 0.73
VARS2Q5ST30 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.6■□□□□ 0.73
VARS2Q5ST30 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.6■□□□□ 0.73
VARS2Q5ST30 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VARS2Q5ST30 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 LINC00265-3P-201ENST00000447588 903 ntBASIC19.59■□□□□ 0.73
VARS2Q5ST30 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.59■□□□□ 0.73
VARS2Q5ST30 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VARS2Q5ST30 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.59■□□□□ 0.73
VARS2Q5ST30 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.58■□□□□ 0.73
VARS2Q5ST30 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VARS2Q5ST30 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VARS2Q5ST30 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.58■□□□□ 0.73
VARS2Q5ST30 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.58■□□□□ 0.73
VARS2Q5ST30 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VARS2Q5ST30 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
VARS2Q5ST30 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
VARS2Q5ST30 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VARS2Q5ST30 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms