Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 NUS1P1-201ENST00000446295 882 ntBASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 GPR32P1-201ENST00000601788 811 ntBASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 AC024563.2-201ENST00000603282 481 ntBASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 AC116562.4-201ENST00000641316 2276 ntBASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.68■□□□□ 0.26
RNFT1Q5M7Z0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 AL845331.1-201ENST00000424978 1190 ntBASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 KRT18P41-201ENST00000518924 1277 ntBASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNFT1Q5M7Z0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 AL163051.1-201ENST00000569214 1512 ntBASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 AC090616.6-201ENST00000582640 721 ntBASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 AL732292.2-201ENST00000609649 430 ntBASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 IGHV3-41-201ENST00000613121 348 ntBASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 AC083906.6-201ENST00000641366 219 ntBASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNFT1Q5M7Z0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 AC246785.2-201ENST00000432512 513 ntBASIC16.65■□□□□ 0.26
RNFT1Q5M7Z0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms