Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.56■□□□□ 0.4
GABRA4P48169 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GABRA4P48169 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.56■□□□□ 0.4
GABRA4P48169 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GABRA4P48169 AC069148.1-201ENST00000608741 768 ntBASIC17.56■□□□□ 0.4
GABRA4P48169 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GABRA4P48169 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.56■□□□□ 0.4
GABRA4P48169 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.56■□□□□ 0.4
GABRA4P48169 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRA4P48169 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
GABRA4P48169 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GABRA4P48169 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.55■□□□□ 0.4
GABRA4P48169 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.55■□□□□ 0.4
GABRA4P48169 MYLKP1-201ENST00000509077 1580 ntBASIC17.55■□□□□ 0.4
GABRA4P48169 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.55■□□□□ 0.4
GABRA4P48169 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.55■□□□□ 0.4
GABRA4P48169 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.55■□□□□ 0.4
GABRA4P48169 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GABRA4P48169 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.55■□□□□ 0.4
GABRA4P48169 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.55■□□□□ 0.4
GABRA4P48169 NPAP1P7-201ENST00000613027 823 ntBASIC17.55■□□□□ 0.4
GABRA4P48169 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.55■□□□□ 0.4
GABRA4P48169 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRA4P48169 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
GABRA4P48169 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.54■□□□□ 0.4
GABRA4P48169 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 AC016734.2-201ENST00000624325 1377 ntBASIC17.54■□□□□ 0.4
GABRA4P48169 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.54■□□□□ 0.4
GABRA4P48169 AL031598.1-201ENST00000561511 1773 ntBASIC17.54■□□□□ 0.4
GABRA4P48169 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 MIR149-201ENST00000384879 89 ntBASIC17.54■□□□□ 0.4
GABRA4P48169 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
GABRA4P48169 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 ATP5G2P1-201ENST00000433580 426 ntBASIC17.54■□□□□ 0.4
GABRA4P48169 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.54■□□□□ 0.4
GABRA4P48169 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.54■□□□□ 0.4
GABRA4P48169 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GABRA4P48169 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 ANO7L1-203ENST00000602586 1720 ntBASIC17.54■□□□□ 0.4
GABRA4P48169 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.54■□□□□ 0.4
GABRA4P48169 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
GABRA4P48169 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.54■□□□□ 0.4
GABRA4P48169 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.54■□□□□ 0.4
GABRA4P48169 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRA4P48169 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABRA4P48169 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABRA4P48169 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABRA4P48169 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
GABRA4P48169 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABRA4P48169 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
GABRA4P48169 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GABRA4P48169 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABRA4P48169 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.53■□□□□ 0.4
GABRA4P48169 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GABRA4P48169 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.53■□□□□ 0.4
GABRA4P48169 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.53■□□□□ 0.4
GABRA4P48169 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.53■□□□□ 0.4
GABRA4P48169 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.53■□□□□ 0.4
GABRA4P48169 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.53■□□□□ 0.4
GABRA4P48169 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.53■□□□□ 0.4
GABRA4P48169 AC093458.2-201ENST00000623150 629 ntBASIC17.53■□□□□ 0.4
GABRA4P48169 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABRA4P48169 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
GABRA4P48169 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.53■□□□□ 0.4
GABRA4P48169 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.53■□□□□ 0.4
GABRA4P48169 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GABRA4P48169 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GABRA4P48169 CROCCP3-202ENST00000420820 1947 ntBASIC17.53■□□□□ 0.4
GABRA4P48169 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
GABRA4P48169 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.52■□□□□ 0.4
GABRA4P48169 SDHAP2-201ENST00000455183 2001 ntBASIC17.52■□□□□ 0.4
GABRA4P48169 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABRA4P48169 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABRA4P48169 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABRA4P48169 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABRA4P48169 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABRA4P48169 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GABRA4P48169 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.52■□□□□ 0.4
GABRA4P48169 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.52■□□□□ 0.4
GABRA4P48169 AC024563.2-201ENST00000603282 481 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms