Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.28■□□□□ 0.68
PTPN9P43378 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN9P43378 LINC01023-201ENST00000606054 436 ntBASIC19.28■□□□□ 0.68
PTPN9P43378 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN9P43378 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN9P43378 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.28■□□□□ 0.68
PTPN9P43378 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN9P43378 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.28■□□□□ 0.68
PTPN9P43378 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTPN9P43378 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PTPN9P43378 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PTPN9P43378 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PTPN9P43378 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.27■□□□□ 0.68
PTPN9P43378 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN9P43378 TERF1P1-201ENST00000311003 1181 ntBASIC19.27■□□□□ 0.68
PTPN9P43378 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.27■□□□□ 0.68
PTPN9P43378 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PTPN9P43378 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PTPN9P43378 AC009065.1-201ENST00000564055 1225 ntBASIC19.27■□□□□ 0.68
PTPN9P43378 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PTPN9P43378 AC010240.3-201ENST00000607688 395 ntBASIC19.27■□□□□ 0.68
PTPN9P43378 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PTPN9P43378 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN9P43378 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.27■□□□□ 0.68
PTPN9P43378 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PTPN9P43378 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.27■□□□□ 0.67
PTPN9P43378 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.27■□□□□ 0.67
PTPN9P43378 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN9P43378 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN9P43378 AL162741.1-201ENST00000565563 1558 ntBASIC19.27■□□□□ 0.67
PTPN9P43378 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN9P43378 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PTPN9P43378 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 AC073508.3-201ENST00000619697 1419 ntBASIC19.26■□□□□ 0.67
PTPN9P43378 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN9P43378 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.26■□□□□ 0.67
PTPN9P43378 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PTPN9P43378 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN9P43378 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 LIN28AP1-201ENST00000429574 405 ntBASIC19.26■□□□□ 0.67
PTPN9P43378 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.26■□□□□ 0.67
PTPN9P43378 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 AC024243.1-201ENST00000609234 778 ntBASIC19.26■□□□□ 0.67
PTPN9P43378 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.26■□□□□ 0.67
PTPN9P43378 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPN9P43378 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.26■□□□□ 0.67
PTPN9P43378 AC009102.3-201ENST00000623118 1491 ntBASIC19.26■□□□□ 0.67
PTPN9P43378 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPN9P43378 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPN9P43378 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN9P43378 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN9P43378 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN9P43378 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN9P43378 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PTPN9P43378 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN9P43378 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN9P43378 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN9P43378 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTPN9P43378 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTPN9P43378 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN9P43378 BICD1-207ENST00000551848 1962 ntBASIC19.25■□□□□ 0.67
PTPN9P43378 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN9P43378 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN9P43378 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPN9P43378 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN9P43378 AL137013.1-201ENST00000432946 1228 ntBASIC19.25■□□□□ 0.67
PTPN9P43378 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN9P43378 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN9P43378 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN9P43378 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTPN9P43378 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPN9P43378 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.25■□□□□ 0.67
PTPN9P43378 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPN9P43378 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms