Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A3P43003 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SLC1A3P43003 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A3P43003 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A3P43003 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A3P43003 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A3P43003 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLC1A3P43003 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A3P43003 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A3P43003 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A3P43003 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A3P43003 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SLC1A3P43003 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A3P43003 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLC1A3P43003 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC1A3P43003 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A3P43003 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC1A3P43003 MIR4497-201ENST00000583208 89 ntBASIC17.07■□□□□ 0.32
SLC1A3P43003 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
SLC1A3P43003 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A3P43003 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLC1A3P43003 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A3P43003 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 LTB4R2-202ENST00000528054 3092 ntBASIC17.07■□□□□ 0.32
SLC1A3P43003 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A3P43003 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A3P43003 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A3P43003 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SLC1A3P43003 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SLC1A3P43003 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SLC1A3P43003 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A3P43003 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A3P43003 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A3P43003 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC1A3P43003 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC1A3P43003 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.06■□□□□ 0.32
SLC1A3P43003 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A3P43003 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SLC1A3P43003 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A3P43003 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A3P43003 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A3P43003 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 AL109659.2-201ENST00000606809 1674 ntBASIC17.06■□□□□ 0.32
SLC1A3P43003 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC1A3P43003 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.06■□□□□ 0.32
SLC1A3P43003 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A3P43003 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A3P43003 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC1A3P43003 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A3P43003 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A3P43003 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A3P43003 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC1A3P43003 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A3P43003 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC1A3P43003 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SLC1A3P43003 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A3P43003 AC008622.2-201ENST00000617006 1229 ntBASIC17.05■□□□□ 0.32
SLC1A3P43003 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms