Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 GMCL1P1-201ENST00000463439 1581 ntBASIC15.97■□□□□ 0.15
CCL1P22362 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.97■□□□□ 0.15
CCL1P22362 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
CCL1P22362 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 FLJ13224-201ENST00000313737 1514 ntBASIC15.97■□□□□ 0.15
CCL1P22362 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CCL1P22362 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CCL1P22362 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCL1P22362 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.97■□□□□ 0.15
CCL1P22362 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 PCDHB18P-201ENST00000524813 2368 ntBASIC15.97■□□□□ 0.15
CCL1P22362 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCL1P22362 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCL1P22362 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCL1P22362 AC036111.1-201ENST00000533973 1582 ntBASIC15.96■□□□□ 0.15
CCL1P22362 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL1P22362 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL1P22362 HOXB1-202ENST00000577092 1414 ntBASIC15.96■□□□□ 0.15
CCL1P22362 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL1P22362 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCL1P22362 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCL1P22362 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL1P22362 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCL1P22362 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL1P22362 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL1P22362 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL1P22362 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.96■□□□□ 0.15
CCL1P22362 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL1P22362 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.96■□□□□ 0.15
CCL1P22362 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.96■□□□□ 0.15
CCL1P22362 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.96■□□□□ 0.15
CCL1P22362 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.96■□□□□ 0.15
CCL1P22362 AC005332.8-201ENST00000622750 2735 ntBASIC15.96■□□□□ 0.15
CCL1P22362 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCL1P22362 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCL1P22362 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCL1P22362 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCL1P22362 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCL1P22362 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CCL1P22362 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCL1P22362 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCL1P22362 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.95■□□□□ 0.14
CCL1P22362 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.95■□□□□ 0.14
CCL1P22362 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CCL1P22362 CRYGFP-201ENST00000418459 633 ntBASIC15.95■□□□□ 0.14
CCL1P22362 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.95■□□□□ 0.14
CCL1P22362 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.95■□□□□ 0.14
CCL1P22362 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.95■□□□□ 0.14
CCL1P22362 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.95■□□□□ 0.14
CCL1P22362 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCL1P22362 REXO1L9P-201ENST00000604264 2108 ntBASIC15.95■□□□□ 0.14
CCL1P22362 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.95■□□□□ 0.14
CCL1P22362 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CCL1P22362 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
CCL1P22362 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.95■□□□□ 0.14
CCL1P22362 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCL1P22362 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCL1P22362 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCL1P22362 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCL1P22362 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCL1P22362 KRT8P7-201ENST00000533003 1432 ntBASIC15.94■□□□□ 0.14
CCL1P22362 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms