Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.49■□□□□ 0.71
RARAP10276 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.49■□□□□ 0.71
RARAP10276 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
RARAP10276 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RARAP10276 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.49■□□□□ 0.71
RARAP10276 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.49■□□□□ 0.71
RARAP10276 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.49■□□□□ 0.71
RARAP10276 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARAP10276 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.49■□□□□ 0.71
RARAP10276 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARAP10276 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARAP10276 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARAP10276 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RARAP10276 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RARAP10276 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.48■□□□□ 0.71
RARAP10276 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.48■□□□□ 0.71
RARAP10276 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RARAP10276 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RARAP10276 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RARAP10276 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 SNORA78-201ENST00000459373 127 ntBASIC19.48■□□□□ 0.71
RARAP10276 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.48■□□□□ 0.71
RARAP10276 AP005242.2-201ENST00000580065 1175 ntBASIC19.48■□□□□ 0.71
RARAP10276 MIR4785-201ENST00000585005 73 ntBASIC19.48■□□□□ 0.71
RARAP10276 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.48■□□□□ 0.71
RARAP10276 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RARAP10276 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.48■□□□□ 0.71
RARAP10276 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RARAP10276 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RARAP10276 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RARAP10276 AC008556.1-201ENST00000610908 2040 ntBASIC19.47■□□□□ 0.71
RARAP10276 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.47■□□□□ 0.71
RARAP10276 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RARAP10276 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RARAP10276 AL109659.2-201ENST00000606809 1674 ntBASIC19.47■□□□□ 0.71
RARAP10276 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.47■□□□□ 0.71
RARAP10276 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.47■□□□□ 0.71
RARAP10276 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.47■□□□□ 0.71
RARAP10276 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 CA15P1-201ENST00000481698 905 ntBASIC19.47■□□□□ 0.71
RARAP10276 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.47■□□□□ 0.71
RARAP10276 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 AC067852.2-201ENST00000590513 2313 ntBASIC19.47■□□□□ 0.71
RARAP10276 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
RARAP10276 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.47■□□□□ 0.71
RARAP10276 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RARAP10276 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 GPAT2P1-201ENST00000444924 1672 ntBASIC19.46■□□□□ 0.71
RARAP10276 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.46■□□□□ 0.71
RARAP10276 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.46■□□□□ 0.71
RARAP10276 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 UNC93B2-201ENST00000285383 730 ntBASIC19.46■□□□□ 0.71
RARAP10276 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RARAP10276 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 AL023284.2-201ENST00000405850 579 ntBASIC19.46■□□□□ 0.71
RARAP10276 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.46■□□□□ 0.71
RARAP10276 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
RARAP10276 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.46■□□□□ 0.71
RARAP10276 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RARAP10276 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.46■□□□□ 0.71
RARAP10276 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms