Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 AC004951.3-201ENST00000418645 1148 ntBASIC16.29■□□□□ 0.2
UBCP0CG48 AL353807.1-201ENST00000427475 662 ntBASIC16.29■□□□□ 0.2
UBCP0CG48 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.29■□□□□ 0.2
UBCP0CG48 KSR1P1-201ENST00000446298 240 ntBASIC16.29■□□□□ 0.2
UBCP0CG48 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
UBCP0CG48 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.29■□□□□ 0.2
UBCP0CG48 AC026271.3-201ENST00000571884 352 ntBASIC16.29■□□□□ 0.2
UBCP0CG48 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBCP0CG48 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UBCP0CG48 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.29■□□□□ 0.2
UBCP0CG48 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
UBCP0CG48 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.29■□□□□ 0.2
UBCP0CG48 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.29■□□□□ 0.2
UBCP0CG48 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.29■□□□□ 0.2
UBCP0CG48 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBCP0CG48 AL357033.4-201ENST00000617703 1807 ntBASIC16.29■□□□□ 0.2
UBCP0CG48 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBCP0CG48 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBCP0CG48 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBCP0CG48 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.28■□□□□ 0.2
UBCP0CG48 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UBCP0CG48 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
UBCP0CG48 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBCP0CG48 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.28■□□□□ 0.2
UBCP0CG48 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.28■□□□□ 0.2
UBCP0CG48 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UBCP0CG48 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.28■□□□□ 0.2
UBCP0CG48 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.28■□□□□ 0.2
UBCP0CG48 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 PRORSD1P-202ENST00000563365 2154 ntBASIC16.28■□□□□ 0.2
UBCP0CG48 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
UBCP0CG48 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
UBCP0CG48 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
UBCP0CG48 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBCP0CG48 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
UBCP0CG48 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBCP0CG48 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.27■□□□□ 0.2
UBCP0CG48 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
UBCP0CG48 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
UBCP0CG48 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.27■□□□□ 0.2
UBCP0CG48 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBCP0CG48 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.27■□□□□ 0.2
UBCP0CG48 ESRRAP1-201ENST00000400596 1257 ntBASIC16.27■□□□□ 0.2
UBCP0CG48 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.27■□□□□ 0.2
UBCP0CG48 AC091390.4-202ENST00000476426 537 ntBASIC16.27■□□□□ 0.2
UBCP0CG48 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.27■□□□□ 0.2
UBCP0CG48 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.27■□□□□ 0.2
UBCP0CG48 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
UBCP0CG48 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.27■□□□□ 0.2
UBCP0CG48 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.27■□□□□ 0.2
UBCP0CG48 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBCP0CG48 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBCP0CG48 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UBCP0CG48 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBCP0CG48 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBCP0CG48 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UBCP0CG48 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms