Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL1P09341 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL1P09341 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.4□□□□□ -0.1
CXCL1P09341 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CXCL1P09341 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CXCL1P09341 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL1P09341 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL1P09341 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CXCL1P09341 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL1P09341 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.4□□□□□ -0.1
CXCL1P09341 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCL1P09341 AC013268.1-206ENST00000638368 961 ntBASIC14.4□□□□□ -0.1
CXCL1P09341 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.4□□□□□ -0.1
CXCL1P09341 AC112229.1-201ENST00000639295 961 ntBASIC14.4□□□□□ -0.1
CXCL1P09341 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CXCL1P09341 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CXCL1P09341 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CXCL1P09341 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CXCL1P09341 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.4□□□□□ -0.11
CXCL1P09341 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CXCL1P09341 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CXCL1P09341 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 LINC02199-201ENST00000506655 2702 ntBASIC14.39□□□□□ -0.11
CXCL1P09341 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CXCL1P09341 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 ZNF815P-204ENST00000434898 1737 ntBASIC14.39□□□□□ -0.11
CXCL1P09341 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.39□□□□□ -0.11
CXCL1P09341 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL1P09341 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL1P09341 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 AL023806.1-201ENST00000603994 1649 ntBASIC14.39□□□□□ -0.11
CXCL1P09341 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL1P09341 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
CXCL1P09341 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.39□□□□□ -0.11
CXCL1P09341 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CXCL1P09341 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.39□□□□□ -0.11
CXCL1P09341 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL1P09341 LINC00602-201ENST00000629776 2065 ntBASIC14.38□□□□□ -0.11
CXCL1P09341 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CXCL1P09341 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CXCL1P09341 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.38□□□□□ -0.11
CXCL1P09341 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CXCL1P09341 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CXCL1P09341 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CXCL1P09341 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms