Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP2P08253 GCSHP2-201ENST00000560971 527 ntBASIC18.68■□□□□ 0.58
MMP2P08253 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
MMP2P08253 AC010240.3-201ENST00000607688 395 ntBASIC18.68■□□□□ 0.58
MMP2P08253 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP2P08253 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP2P08253 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MMP2P08253 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
MMP2P08253 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP2P08253 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP2P08253 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.68■□□□□ 0.58
MMP2P08253 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
MMP2P08253 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MMP2P08253 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP2P08253 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP2P08253 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.68■□□□□ 0.58
MMP2P08253 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MMP2P08253 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MMP2P08253 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MMP2P08253 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MMP2P08253 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MMP2P08253 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP2P08253 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MMP2P08253 AL441883.1-201ENST00000566170 1045 ntBASIC18.67■□□□□ 0.58
MMP2P08253 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.67■□□□□ 0.58
MMP2P08253 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP2P08253 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.67■□□□□ 0.58
MMP2P08253 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
MMP2P08253 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP2P08253 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.67■□□□□ 0.58
MMP2P08253 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MMP2P08253 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MMP2P08253 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.67■□□□□ 0.58
MMP2P08253 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MMP2P08253 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP2P08253 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP2P08253 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP2P08253 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MMP2P08253 AC117947.1-201ENST00000427448 529 ntBASIC18.66■□□□□ 0.58
MMP2P08253 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.66■□□□□ 0.58
MMP2P08253 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.66■□□□□ 0.58
MMP2P08253 COX11P1-201ENST00000489116 835 ntBASIC18.66■□□□□ 0.58
MMP2P08253 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP2P08253 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.66■□□□□ 0.58
MMP2P08253 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP2P08253 AC139887.4-201ENST00000607877 719 ntBASIC18.66■□□□□ 0.58
MMP2P08253 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.66■□□□□ 0.58
MMP2P08253 AC006011.2-201ENST00000621313 1158 ntBASIC18.66■□□□□ 0.58
MMP2P08253 AC011558.1-201ENST00000623459 338 ntBASIC18.66■□□□□ 0.58
MMP2P08253 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MMP2P08253 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MMP2P08253 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.66■□□□□ 0.58
MMP2P08253 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 MIR149-201ENST00000384879 89 ntBASIC18.65■□□□□ 0.58
MMP2P08253 AP000523.1-201ENST00000398242 1049 ntBASIC18.65■□□□□ 0.58
MMP2P08253 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 BX664615.1-201ENST00000443558 458 ntBASIC18.65■□□□□ 0.58
MMP2P08253 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 MIR3180-4-201ENST00000582223 153 ntBASIC18.65■□□□□ 0.58
MMP2P08253 AC092865.7-201ENST00000641832 219 ntBASIC18.65■□□□□ 0.58
MMP2P08253 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MMP2P08253 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP2P08253 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MMP2P08253 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.64■□□□□ 0.58
MMP2P08253 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MMP2P08253 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MMP2P08253 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MMP2P08253 BICD1-207ENST00000551848 1962 ntBASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms