Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.71■□□□□ 0.59
SRPRAP08240 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.71■□□□□ 0.59
SRPRAP08240 TSPY22P-201ENST00000427496 604 ntBASIC18.71■□□□□ 0.59
SRPRAP08240 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.71■□□□□ 0.59
SRPRAP08240 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.71■□□□□ 0.59
SRPRAP08240 RNF126P1-202ENST00000569893 925 ntBASIC18.71■□□□□ 0.59
SRPRAP08240 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.71■□□□□ 0.59
SRPRAP08240 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.71■□□□□ 0.59
SRPRAP08240 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SRPRAP08240 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SRPRAP08240 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SRPRAP08240 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.71■□□□□ 0.59
SRPRAP08240 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.71■□□□□ 0.59
SRPRAP08240 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SRPRAP08240 KRT89P-201ENST00000620027 1478 ntBASIC18.71■□□□□ 0.59
SRPRAP08240 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SRPRAP08240 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.7■□□□□ 0.58
SRPRAP08240 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.7■□□□□ 0.58
SRPRAP08240 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.7■□□□□ 0.58
SRPRAP08240 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.7■□□□□ 0.58
SRPRAP08240 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 MIR149-201ENST00000384879 89 ntBASIC18.7■□□□□ 0.58
SRPRAP08240 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.7■□□□□ 0.58
SRPRAP08240 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SRPRAP08240 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.7■□□□□ 0.58
SRPRAP08240 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
SRPRAP08240 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.7■□□□□ 0.58
SRPRAP08240 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.7■□□□□ 0.58
SRPRAP08240 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SRPRAP08240 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.7■□□□□ 0.58
SRPRAP08240 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.69■□□□□ 0.58
SRPRAP08240 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.69■□□□□ 0.58
SRPRAP08240 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SRPRAP08240 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SRPRAP08240 CHCHD2P8-201ENST00000429873 447 ntBASIC18.69■□□□□ 0.58
SRPRAP08240 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.69■□□□□ 0.58
SRPRAP08240 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.69■□□□□ 0.58
SRPRAP08240 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.69■□□□□ 0.58
SRPRAP08240 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.69■□□□□ 0.58
SRPRAP08240 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.69■□□□□ 0.58
SRPRAP08240 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SRPRAP08240 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SRPRAP08240 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.69■□□□□ 0.58
SRPRAP08240 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SRPRAP08240 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SRPRAP08240 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SRPRAP08240 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.68■□□□□ 0.58
SRPRAP08240 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.68■□□□□ 0.58
SRPRAP08240 AC005332.3-201ENST00000589904 676 ntBASIC18.68■□□□□ 0.58
SRPRAP08240 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.68■□□□□ 0.58
SRPRAP08240 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.68■□□□□ 0.58
SRPRAP08240 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRPRAP08240 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms