Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.58■□□□□ 0.73
RB1P06400 FP475955.4-201ENST00000623131 1990 ntBASIC19.58■□□□□ 0.73
RB1P06400 FAM220CP-201ENST00000395253 831 ntBASIC19.58■□□□□ 0.72
RB1P06400 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.58■□□□□ 0.72
RB1P06400 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.58■□□□□ 0.72
RB1P06400 AC113404.2-201ENST00000507884 177 ntBASIC19.58■□□□□ 0.72
RB1P06400 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.58■□□□□ 0.72
RB1P06400 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.58■□□□□ 0.72
RB1P06400 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.58■□□□□ 0.72
RB1P06400 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RB1P06400 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.58■□□□□ 0.72
RB1P06400 KRT8P50-201ENST00000562022 1438 ntBASIC19.58■□□□□ 0.72
RB1P06400 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RB1P06400 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RB1P06400 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.57■□□□□ 0.72
RB1P06400 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RB1P06400 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RB1P06400 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RB1P06400 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.57■□□□□ 0.72
RB1P06400 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.57■□□□□ 0.72
RB1P06400 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RB1P06400 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.57■□□□□ 0.72
RB1P06400 BX842568.4-201ENST00000421222 227 ntBASIC19.57■□□□□ 0.72
RB1P06400 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RB1P06400 KRT18P41-201ENST00000518924 1277 ntBASIC19.57■□□□□ 0.72
RB1P06400 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.57■□□□□ 0.72
RB1P06400 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RB1P06400 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.57■□□□□ 0.72
RB1P06400 FAM215A-202ENST00000632077 792 ntBASIC19.57■□□□□ 0.72
RB1P06400 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RB1P06400 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RB1P06400 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.57■□□□□ 0.72
RB1P06400 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RB1P06400 LINC01006-201ENST00000333319 2292 ntBASIC19.56■□□□□ 0.72
RB1P06400 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.56■□□□□ 0.72
RB1P06400 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 FGFR3P6-201ENST00000457012 610 ntBASIC19.56■□□□□ 0.72
RB1P06400 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RB1P06400 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.56■□□□□ 0.72
RB1P06400 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.56■□□□□ 0.72
RB1P06400 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RB1P06400 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RB1P06400 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.55■□□□□ 0.72
RB1P06400 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RB1P06400 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.55■□□□□ 0.72
RB1P06400 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.55■□□□□ 0.72
RB1P06400 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 RCN1P2-201ENST00000398357 915 ntBASIC19.55■□□□□ 0.72
RB1P06400 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RB1P06400 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RB1P06400 MIR7706-201ENST00000613747 67 ntBASIC19.55■□□□□ 0.72
RB1P06400 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.55■□□□□ 0.72
RB1P06400 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RB1P06400 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RB1P06400 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
RB1P06400 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
RB1P06400 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 AL163051.1-201ENST00000569214 1512 ntBASIC19.55■□□□□ 0.72
RB1P06400 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.55■□□□□ 0.72
RB1P06400 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RB1P06400 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.55■□□□□ 0.72
RB1P06400 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.54■□□□□ 0.72
RB1P06400 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.54■□□□□ 0.72
RB1P06400 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RB1P06400 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms