Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCRP04035 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCRP04035 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCRP04035 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCRP04035 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HMGCRP04035 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCRP04035 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCRP04035 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.9■□□□□ 0.94
HMGCRP04035 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.9■□□□□ 0.94
HMGCRP04035 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCRP04035 RPL13AP23-201ENST00000480739 586 ntBASIC20.9■□□□□ 0.94
HMGCRP04035 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCRP04035 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.9■□□□□ 0.94
HMGCRP04035 AC096582.2-201ENST00000510860 516 ntBASIC20.9■□□□□ 0.94
HMGCRP04035 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCRP04035 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCRP04035 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCRP04035 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
HMGCRP04035 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.89■□□□□ 0.94
HMGCRP04035 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCRP04035 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCRP04035 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCRP04035 KRT8P32-201ENST00000512863 1461 ntBASIC20.89■□□□□ 0.94
HMGCRP04035 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HMGCRP04035 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.89■□□□□ 0.93
HMGCRP04035 ZNF259P1-201ENST00000407656 1365 ntBASIC20.89■□□□□ 0.93
HMGCRP04035 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HMGCRP04035 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCRP04035 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCRP04035 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
HMGCRP04035 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCRP04035 MIR940-201ENST00000401276 94 ntBASIC20.89■□□□□ 0.93
HMGCRP04035 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCRP04035 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.89■□□□□ 0.93
HMGCRP04035 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
HMGCRP04035 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
HMGCRP04035 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
HMGCRP04035 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCRP04035 Z82202.1-201ENST00000623446 1880 ntBASIC20.89■□□□□ 0.93
HMGCRP04035 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCRP04035 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.89■□□□□ 0.93
HMGCRP04035 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
HMGCRP04035 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.88■□□□□ 0.93
HMGCRP04035 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HMGCRP04035 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCRP04035 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCRP04035 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCRP04035 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCRP04035 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCRP04035 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCRP04035 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HMGCRP04035 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.88■□□□□ 0.93
HMGCRP04035 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCRP04035 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.88■□□□□ 0.93
HMGCRP04035 AL049840.3-201ENST00000602669 611 ntBASIC20.88■□□□□ 0.93
HMGCRP04035 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCRP04035 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGCRP04035 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCRP04035 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCRP04035 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCRP04035 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCRP04035 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCRP04035 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCRP04035 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HMGCRP04035 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCRP04035 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCRP04035 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HMGCRP04035 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HMGCRP04035 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCRP04035 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCRP04035 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
HMGCRP04035 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCRP04035 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HMGCRP04035 AC073648.2-201ENST00000510116 352 ntBASIC20.87■□□□□ 0.93
HMGCRP04035 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HMGCRP04035 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCRP04035 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.87■□□□□ 0.93
HMGCRP04035 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCRP04035 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.87■□□□□ 0.93
HMGCRP04035 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCRP04035 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HMGCRP04035 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCRP04035 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCRP04035 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HMGCRP04035 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGCRP04035 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCRP04035 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HMGCRP04035 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCRP04035 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGCRP04035 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCRP04035 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGCRP04035 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCRP04035 AC125437.2-201ENST00000625180 2167 ntBASIC20.86■□□□□ 0.93
HMGCRP04035 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGCRP04035 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HMGCRP04035 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HMGCRP04035 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCRP04035 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCRP04035 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.86■□□□□ 0.93
HMGCRP04035 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms