Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CD4P01730 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD4P01730 MIR574-201ENST00000385209 96 ntBASIC20.48■□□□□ 0.87
CD4P01730 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD4P01730 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.48■□□□□ 0.87
CD4P01730 AC091607.1-201ENST00000490318 1060 ntBASIC20.48■□□□□ 0.87
CD4P01730 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CD4P01730 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CD4P01730 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CD4P01730 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.48■□□□□ 0.87
CD4P01730 TP73-AS1-207ENST00000624167 988 ntBASIC20.48■□□□□ 0.87
CD4P01730 AF228730.7-201ENST00000641842 219 ntBASIC20.48■□□□□ 0.87
CD4P01730 KRT8P32-201ENST00000512863 1461 ntBASIC20.48■□□□□ 0.87
CD4P01730 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD4P01730 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD4P01730 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CD4P01730 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.47■□□□□ 0.87
CD4P01730 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.47■□□□□ 0.87
CD4P01730 AC024563.2-201ENST00000603282 481 ntBASIC20.47■□□□□ 0.87
CD4P01730 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 AC139530.3-201ENST00000620344 690 ntBASIC20.47■□□□□ 0.87
CD4P01730 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD4P01730 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CD4P01730 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CD4P01730 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.47■□□□□ 0.87
CD4P01730 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.47■□□□□ 0.87
CD4P01730 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.47■□□□□ 0.87
CD4P01730 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 AC034236.2-201ENST00000606662 1610 ntBASIC20.46■□□□□ 0.87
CD4P01730 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 AC006333.2-201ENST00000607957 2099 ntBASIC20.46■□□□□ 0.87
CD4P01730 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.46■□□□□ 0.87
CD4P01730 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 PMS2P1-201ENST00000431037 1228 ntBASIC20.46■□□□□ 0.87
CD4P01730 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.46■□□□□ 0.87
CD4P01730 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CD4P01730 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.46■□□□□ 0.87
CD4P01730 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.46■□□□□ 0.87
CD4P01730 AC064862.7-201ENST00000604520 867 ntBASIC20.46■□□□□ 0.87
CD4P01730 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CD4P01730 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 IL9RP2-201ENST00000423948 1312 ntBASIC20.46■□□□□ 0.87
CD4P01730 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.46■□□□□ 0.87
CD4P01730 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD4P01730 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.45■□□□□ 0.87
CD4P01730 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CD4P01730 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
CD4P01730 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.45■□□□□ 0.86
CD4P01730 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CD4P01730 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CD4P01730 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CD4P01730 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CD4P01730 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CD4P01730 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.45■□□□□ 0.86
CD4P01730 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.45■□□□□ 0.86
CD4P01730 AP001005.1-201ENST00000571755 1248 ntBASIC20.45■□□□□ 0.86
CD4P01730 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CD4P01730 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CD4P01730 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD4P01730 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
CD4P01730 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CD4P01730 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CD4P01730 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.44■□□□□ 0.86
CD4P01730 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.44■□□□□ 0.86
CD4P01730 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CD4P01730 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD4P01730 NUS1P2-201ENST00000417358 873 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms