Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF4O60810 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PRAMEF4O60810 AC087499.1-201ENST00000418141 1075 ntBASIC17.84■□□□□ 0.45
PRAMEF4O60810 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF4O60810 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.84■□□□□ 0.45
PRAMEF4O60810 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.84■□□□□ 0.45
PRAMEF4O60810 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.84■□□□□ 0.45
PRAMEF4O60810 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF4O60810 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.84■□□□□ 0.45
PRAMEF4O60810 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
PRAMEF4O60810 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRAMEF4O60810 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PRAMEF4O60810 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PRAMEF4O60810 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.45
PRAMEF4O60810 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF4O60810 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF4O60810 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.83■□□□□ 0.45
PRAMEF4O60810 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PRAMEF4O60810 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF4O60810 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF4O60810 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.83■□□□□ 0.45
PRAMEF4O60810 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.83■□□□□ 0.45
PRAMEF4O60810 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PRAMEF4O60810 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PRAMEF4O60810 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
PRAMEF4O60810 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 AC093677.2-201ENST00000600169 1863 ntBASIC17.83■□□□□ 0.44
PRAMEF4O60810 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRAMEF4O60810 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PRAMEF4O60810 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF4O60810 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF4O60810 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF4O60810 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF4O60810 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 AP000593.1-201ENST00000393668 712 ntBASIC17.82■□□□□ 0.44
PRAMEF4O60810 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF4O60810 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF4O60810 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF4O60810 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PRAMEF4O60810 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PRAMEF4O60810 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PRAMEF4O60810 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PRAMEF4O60810 SDHAP2-201ENST00000455183 2001 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms