Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX4O14627 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDX4O14627 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX4O14627 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.84■□□□□ 0.45
CDX4O14627 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX4O14627 AC092910.1-201ENST00000482027 1129 ntBASIC17.84■□□□□ 0.45
CDX4O14627 SART3-203ENST00000546611 1184 ntBASIC17.84■□□□□ 0.45
CDX4O14627 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.84■□□□□ 0.45
CDX4O14627 AC012640.2-201ENST00000561606 901 ntBASIC17.84■□□□□ 0.45
CDX4O14627 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
CDX4O14627 MIR3687-2-201ENST00000577708 61 ntBASIC17.84■□□□□ 0.45
CDX4O14627 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDX4O14627 Z83851.2-201ENST00000609564 659 ntBASIC17.84■□□□□ 0.45
CDX4O14627 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX4O14627 MIR3687-1-201ENST00000614492 61 ntBASIC17.84■□□□□ 0.45
CDX4O14627 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX4O14627 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX4O14627 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.84■□□□□ 0.45
CDX4O14627 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDX4O14627 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDX4O14627 HLA-J-201ENST00000462773 1622 ntBASIC17.83■□□□□ 0.45
CDX4O14627 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDX4O14627 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.83■□□□□ 0.45
CDX4O14627 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDX4O14627 KRT8P50-201ENST00000562022 1438 ntBASIC17.83■□□□□ 0.45
CDX4O14627 AP005117.1-201ENST00000584346 1413 ntBASIC17.83■□□□□ 0.45
CDX4O14627 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDX4O14627 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDX4O14627 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDX4O14627 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDX4O14627 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDX4O14627 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX4O14627 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDX4O14627 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDX4O14627 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX4O14627 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX4O14627 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX4O14627 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX4O14627 AC004967.1-201ENST00000453589 447 ntBASIC17.83■□□□□ 0.44
CDX4O14627 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.83■□□□□ 0.44
CDX4O14627 RNA5SP415-201ENST00000517246 115 ntBASIC17.83■□□□□ 0.44
CDX4O14627 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.83■□□□□ 0.44
CDX4O14627 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.83■□□□□ 0.44
CDX4O14627 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX4O14627 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CDX4O14627 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX4O14627 AC068587.9-201ENST00000641814 219 ntBASIC17.83■□□□□ 0.44
CDX4O14627 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.83■□□□□ 0.44
CDX4O14627 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX4O14627 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.83■□□□□ 0.44
CDX4O14627 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX4O14627 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX4O14627 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDX4O14627 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CDX4O14627 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX4O14627 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
CDX4O14627 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX4O14627 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX4O14627 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.82■□□□□ 0.44
CDX4O14627 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CDX4O14627 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CDX4O14627 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.82■□□□□ 0.44
CDX4O14627 DNAJB3-201ENST00000446806 729 ntBASIC17.82■□□□□ 0.44
CDX4O14627 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.82■□□□□ 0.44
CDX4O14627 AC068472.1-201ENST00000474589 881 ntBASIC17.82■□□□□ 0.44
CDX4O14627 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.82■□□□□ 0.44
CDX4O14627 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.82■□□□□ 0.44
CDX4O14627 AC009533.2-201ENST00000543664 586 ntBASIC17.82■□□□□ 0.44
CDX4O14627 AC040169.1-201ENST00000565382 521 ntBASIC17.82■□□□□ 0.44
CDX4O14627 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDX4O14627 AC134684.3-201ENST00000641758 218 ntBASIC17.82■□□□□ 0.44
CDX4O14627 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDX4O14627 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.82■□□□□ 0.44
CDX4O14627 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX4O14627 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDX4O14627 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX4O14627 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.82■□□□□ 0.44
CDX4O14627 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDX4O14627 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.81■□□□□ 0.44
CDX4O14627 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDX4O14627 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDX4O14627 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.81■□□□□ 0.44
CDX4O14627 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDX4O14627 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDX4O14627 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDX4O14627 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDX4O14627 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.81■□□□□ 0.44
CDX4O14627 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.81■□□□□ 0.44
CDX4O14627 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.81■□□□□ 0.44
CDX4O14627 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDX4O14627 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.81■□□□□ 0.44
CDX4O14627 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.81■□□□□ 0.44
CDX4O14627 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.81■□□□□ 0.44
CDX4O14627 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.81■□□□□ 0.44
CDX4O14627 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDX4O14627 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.81■□□□□ 0.44
CDX4O14627 Z98044.1-201ENST00000632503 1764 ntBASIC17.81■□□□□ 0.44
CDX4O14627 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDX4O14627 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDX4O14627 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms