Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TAF4O00268 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TAF4O00268 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.15■□□□□ 0.5
TAF4O00268 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.15■□□□□ 0.5
TAF4O00268 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.15■□□□□ 0.5
TAF4O00268 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.15■□□□□ 0.5
TAF4O00268 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.15■□□□□ 0.5
TAF4O00268 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TAF4O00268 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
TAF4O00268 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TAF4O00268 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TAF4O00268 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.15■□□□□ 0.5
TAF4O00268 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.14■□□□□ 0.5
TAF4O00268 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TAF4O00268 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.14■□□□□ 0.49
TAF4O00268 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TAF4O00268 MIR1233-2-201ENST00000408138 82 ntBASIC18.14■□□□□ 0.49
TAF4O00268 MIR1233-1-201ENST00000408722 82 ntBASIC18.14■□□□□ 0.49
TAF4O00268 AL590627.1-203ENST00000421194 1026 ntBASIC18.14■□□□□ 0.49
TAF4O00268 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.14■□□□□ 0.49
TAF4O00268 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TAF4O00268 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.14■□□□□ 0.49
TAF4O00268 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.14■□□□□ 0.49
TAF4O00268 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TAF4O00268 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.14■□□□□ 0.49
TAF4O00268 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TAF4O00268 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TAF4O00268 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TAF4O00268 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TAF4O00268 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.13■□□□□ 0.49
TAF4O00268 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.13■□□□□ 0.49
TAF4O00268 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TAF4O00268 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.13■□□□□ 0.49
TAF4O00268 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.13■□□□□ 0.49
TAF4O00268 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.13■□□□□ 0.49
TAF4O00268 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.13■□□□□ 0.49
TAF4O00268 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TAF4O00268 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.13■□□□□ 0.49
TAF4O00268 AL121772.3-201ENST00000610840 674 ntBASIC18.13■□□□□ 0.49
TAF4O00268 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
TAF4O00268 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.13■□□□□ 0.49
TAF4O00268 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.13■□□□□ 0.49
TAF4O00268 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
TAF4O00268 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
TAF4O00268 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TAF4O00268 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TAF4O00268 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TAF4O00268 AC020763.4-201ENST00000623414 4170 ntBASIC18.12■□□□□ 0.49
TAF4O00268 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TAF4O00268 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.12■□□□□ 0.49
TAF4O00268 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TAF4O00268 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.12■□□□□ 0.49
TAF4O00268 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
TAF4O00268 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.12■□□□□ 0.49
TAF4O00268 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.12■□□□□ 0.49
TAF4O00268 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.12■□□□□ 0.49
TAF4O00268 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TAF4O00268 FP700111.2-201ENST00000619190 1892 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms