Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 AC012306.2-201ENST00000609350 630 ntBASIC17.36■□□□□ 0.37
CLCA1A8K7I4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCA1A8K7I4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCA1A8K7I4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 RCN1P1-201ENST00000400413 996 ntBASIC17.34■□□□□ 0.37
CLCA1A8K7I4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 SDHAP1-207ENST00000440850 2000 ntBASIC17.34■□□□□ 0.37
CLCA1A8K7I4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 RCC2P6-201ENST00000526625 1557 ntBASIC17.34■□□□□ 0.37
CLCA1A8K7I4 KRT8P9-201ENST00000558927 1449 ntBASIC17.34■□□□□ 0.37
CLCA1A8K7I4 FITM1-202ENST00000559294 800 ntBASIC17.34■□□□□ 0.37
CLCA1A8K7I4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 DGCR10-201ENST00000609839 495 ntBASIC17.34■□□□□ 0.37
CLCA1A8K7I4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCA1A8K7I4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLCA1A8K7I4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.33■□□□□ 0.36
CLCA1A8K7I4 AC011298.2-201ENST00000617989 482 ntBASIC17.33■□□□□ 0.36
CLCA1A8K7I4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.33■□□□□ 0.36
CLCA1A8K7I4 AC104417.2-201ENST00000562989 1793 ntBASIC17.33■□□□□ 0.36
CLCA1A8K7I4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.33■□□□□ 0.36
CLCA1A8K7I4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms