Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 KRT8P41-201ENST00000533985 1514 ntBASIC20.03■□□□□ 0.8
USP27XA6NNY8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.03■□□□□ 0.8
USP27XA6NNY8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
USP27XA6NNY8 AL160286.2-201ENST00000567150 934 ntBASIC20.03■□□□□ 0.8
USP27XA6NNY8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
USP27XA6NNY8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
USP27XA6NNY8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.03■□□□□ 0.8
USP27XA6NNY8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP27XA6NNY8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP27XA6NNY8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 BX276092.2-201ENST00000417668 665 ntBASIC20.02■□□□□ 0.8
USP27XA6NNY8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 KRT18P5-201ENST00000436075 1291 ntBASIC20.02■□□□□ 0.8
USP27XA6NNY8 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 RAP2CP1-201ENST00000605103 478 ntBASIC20.02■□□□□ 0.8
USP27XA6NNY8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 HLA-A-209ENST00000638375 975 ntBASIC20.02■□□□□ 0.8
USP27XA6NNY8 MYC-208ENST00000641036 567 ntBASIC20.02■□□□□ 0.8
USP27XA6NNY8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
USP27XA6NNY8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP27XA6NNY8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP27XA6NNY8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP27XA6NNY8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP27XA6NNY8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.02■□□□□ 0.79
USP27XA6NNY8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
USP27XA6NNY8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP27XA6NNY8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
USP27XA6NNY8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
USP27XA6NNY8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP27XA6NNY8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.01■□□□□ 0.79
USP27XA6NNY8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20■□□□□ 0.79
USP27XA6NNY8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20■□□□□ 0.79
USP27XA6NNY8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20■□□□□ 0.79
USP27XA6NNY8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20■□□□□ 0.79
USP27XA6NNY8 UBALD1-205ENST00000590891 2641 ntBASIC20■□□□□ 0.79
USP27XA6NNY8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
USP27XA6NNY8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20■□□□□ 0.79
USP27XA6NNY8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
USP27XA6NNY8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
USP27XA6NNY8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP27XA6NNY8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP27XA6NNY8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20■□□□□ 0.79
USP27XA6NNY8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20■□□□□ 0.79
USP27XA6NNY8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20■□□□□ 0.79
USP27XA6NNY8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
USP27XA6NNY8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20■□□□□ 0.79
USP27XA6NNY8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20■□□□□ 0.79
USP27XA6NNY8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP27XA6NNY8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
USP27XA6NNY8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20■□□□□ 0.79
USP27XA6NNY8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
USP27XA6NNY8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP27XA6NNY8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP27XA6NNY8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP27XA6NNY8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP27XA6NNY8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP27XA6NNY8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP27XA6NNY8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USP27XA6NNY8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.99■□□□□ 0.79
USP27XA6NNY8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.99■□□□□ 0.79
USP27XA6NNY8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms