Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 KRT8P3-201ENST00000519669 1449 ntBASIC19.32■□□□□ 0.68
XIRP2A4UGR9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 LINC01006-201ENST00000333319 2292 ntBASIC19.32■□□□□ 0.68
XIRP2A4UGR9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 AC009533.2-201ENST00000543664 586 ntBASIC19.32■□□□□ 0.68
XIRP2A4UGR9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 AC104390.1-201ENST00000555663 520 ntBASIC19.32■□□□□ 0.68
XIRP2A4UGR9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
XIRP2A4UGR9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 AC011840.4-201ENST00000578471 627 ntBASIC19.31■□□□□ 0.68
XIRP2A4UGR9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 HLA-J-201ENST00000462773 1622 ntBASIC19.31■□□□□ 0.68
XIRP2A4UGR9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 AC005082.1-201ENST00000413042 2259 ntBASIC19.31■□□□□ 0.68
XIRP2A4UGR9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.31■□□□□ 0.68
XIRP2A4UGR9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
XIRP2A4UGR9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 AC002347.1-201ENST00000569543 541 ntBASIC19.3■□□□□ 0.68
XIRP2A4UGR9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 AC106028.4-201ENST00000614509 607 ntBASIC19.3■□□□□ 0.68
XIRP2A4UGR9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 AL353692.3-201ENST00000407031 1396 ntBASIC19.3■□□□□ 0.68
XIRP2A4UGR9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 COX20P2-201ENST00000452636 358 ntBASIC19.3■□□□□ 0.68
XIRP2A4UGR9 Z83851.2-201ENST00000609564 659 ntBASIC19.3■□□□□ 0.68
XIRP2A4UGR9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 MIR4469-201ENST00000583919 79 ntBASIC19.3■□□□□ 0.68
XIRP2A4UGR9 MTDHP5-201ENST00000598980 586 ntBASIC19.3■□□□□ 0.68
XIRP2A4UGR9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.3■□□□□ 0.68
XIRP2A4UGR9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.29■□□□□ 0.68
XIRP2A4UGR9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.29■□□□□ 0.68
XIRP2A4UGR9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 MIR1199-201ENST00000621445 119 ntBASIC19.29■□□□□ 0.68
XIRP2A4UGR9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
XIRP2A4UGR9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms