Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 AC068880.1-201ENST00000507289 2297 ntBASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 FSCN1P1-201ENST00000568912 1481 ntBASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 NOC2LP2-201ENST00000407594 1944 ntBASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 AC008556.1-201ENST00000610908 2040 ntBASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV27A0A087WT01 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV27A0A087WT01 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV27A0A087WT01 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV27A0A087WT01 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 CD177P1-201ENST00000606252 935 ntBASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV27A0A087WT01 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 PRORSD1P-201ENST00000295112 541 ntBASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 AP000692.2-201ENST00000608391 879 ntBASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 AC008622.2-201ENST00000617006 1229 ntBASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV27A0A087WT01 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms