Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PCDHA12-202ENST00000613593 2588 ntBASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 AP002982.1-201ENST00000492365 877 ntBASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 AC142381.4-202ENST00000563973 229 ntBASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 AL160286.2-201ENST00000567150 934 ntBASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 LINC00896-202ENST00000609602 2128 ntBASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AL353807.1-201ENST00000427475 662 ntBASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AL359736.2-201ENST00000621992 437 ntBASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 HTR7P1-201ENST00000538670 1336 ntBASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.59□□□□□ -0.23
HHLA3Q9XRX5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.58□□□□□ -0.23
HHLA3Q9XRX5 AC126763.1-201ENST00000552015 2118 ntBASIC13.58□□□□□ -0.23
HHLA3Q9XRX5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
HHLA3Q9XRX5 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HHLA3Q9XRX5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HHLA3Q9XRX5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HHLA3Q9XRX5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms