Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDK11AQ9UQ88 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 AC120114.3-201ENST00000611923 658 ntBASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDK11AQ9UQ88 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 BNIP3P18-201ENST00000593976 575 ntBASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CDK11AQ9UQ88 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
CDK11AQ9UQ88 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CDK11AQ9UQ88 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC28.64■■■□□ 2.17
CDK11AQ9UQ88 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CDK11AQ9UQ88 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
CDK11AQ9UQ88 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC28.64■■■□□ 2.17
CDK11AQ9UQ88 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC28.64■■■□□ 2.17
CDK11AQ9UQ88 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC28.64■■■□□ 2.17
CDK11AQ9UQ88 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 TP73-AS1-207ENST00000624167 988 ntBASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 ANKRD20A8P-203ENST00000641373 517 ntBASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CDK11AQ9UQ88 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 AL590627.1-203ENST00000421194 1026 ntBASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 RNA5SP419-201ENST00000515908 135 ntBASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 AC008687.5-201ENST00000593746 558 ntBASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDK11AQ9UQ88 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 MTMR9LP-203ENST00000426597 1545 ntBASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 AC113404.2-201ENST00000507884 177 ntBASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 AP001005.1-201ENST00000571755 1248 ntBASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 NFYC-AS1-201ENST00000606277 1687 ntBASIC28.61■■■□□ 2.17
CDK11AQ9UQ88 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDK11AQ9UQ88 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms