Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 KRT16P5-201ENST00000455284 522 ntBASIC16.8■□□□□ 0.28
HINT3Q9NQE9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HINT3Q9NQE9 KRT8P3-201ENST00000519669 1449 ntBASIC16.79■□□□□ 0.28
HINT3Q9NQE9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 AL357033.4-201ENST00000617703 1807 ntBASIC16.79■□□□□ 0.28
HINT3Q9NQE9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HINT3Q9NQE9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 RARRES2P10-201ENST00000564312 460 ntBASIC16.78■□□□□ 0.28
HINT3Q9NQE9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 MYC-208ENST00000641036 567 ntBASIC16.78■□□□□ 0.28
HINT3Q9NQE9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 KRT8P45-201ENST00000414328 1447 ntBASIC16.78■□□□□ 0.28
HINT3Q9NQE9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 AC112777.1-201ENST00000540175 1423 ntBASIC16.78■□□□□ 0.28
HINT3Q9NQE9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.78■□□□□ 0.28
HINT3Q9NQE9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms