Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 IGHV3-22-201ENST00000520721 359 ntBASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 LINC02084-201ENST00000606069 1096 ntBASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZFYVE28Q9HCC9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 FEM1AP3-201ENST00000403722 1741 ntBASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 AL591424.1-201ENST00000442569 1213 ntBASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 AC010327.4-202ENST00000591484 748 ntBASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 AP001160.2-201ENST00000596071 487 ntBASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZFYVE28Q9HCC9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 RPSAP43-201ENST00000402237 625 ntBASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 AC083906.6-201ENST00000641366 219 ntBASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 AC079781.4-201ENST00000641908 219 ntBASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZFYVE28Q9HCC9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZFYVE28Q9HCC9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZFYVE28Q9HCC9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZFYVE28Q9HCC9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 AC027796.2-201ENST00000575326 344 ntBASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 MIR3687-2-201ENST00000577708 61 ntBASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 AP001269.4-201ENST00000609611 512 ntBASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 MIR3687-1-201ENST00000614492 61 ntBASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.14■□□□□ 0.97
ZFYVE28Q9HCC9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms