Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 AC093503.3-201ENST00000624917 2352 ntBASIC21.89■■□□□ 1.1
RNF41Q9H4P4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF41Q9H4P4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 AL163051.1-201ENST00000569214 1512 ntBASIC21.89■■□□□ 1.09
RNF41Q9H4P4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF41Q9H4P4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF41Q9H4P4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 SPDYE15P-201ENST00000424157 909 ntBASIC21.87■■□□□ 1.09
RNF41Q9H4P4 AL359075.1-203ENST00000462729 1002 ntBASIC21.87■■□□□ 1.09
RNF41Q9H4P4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 AL157888.1-201ENST00000631930 593 ntBASIC21.87■■□□□ 1.09
RNF41Q9H4P4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF41Q9H4P4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 MIR1224-201ENST00000408193 85 ntBASIC21.86■■□□□ 1.09
RNF41Q9H4P4 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.86■■□□□ 1.09
RNF41Q9H4P4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF41Q9H4P4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms