Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 LINC01568-207ENST00000641790 1380 ntBASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 AC087499.1-201ENST00000418141 1075 ntBASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 AC104390.1-201ENST00000555663 520 ntBASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCSER1Q9C0I3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCSER1Q9C0I3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCSER1Q9C0I3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.77■□□□□ 0.91
CCSER1Q9C0I3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.77■□□□□ 0.91
CCSER1Q9C0I3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCSER1Q9C0I3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
CCSER1Q9C0I3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 AC112497.1-201ENST00000624824 639 ntBASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 ABALON-201ENST00000629058 1903 ntBASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCSER1Q9C0I3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 AC093677.2-201ENST00000600169 1863 ntBASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 AL512604.3-201ENST00000569583 964 ntBASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 MIR3180-4-201ENST00000582223 153 ntBASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 AC145285.6-201ENST00000604632 637 ntBASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 SDHAP2-201ENST00000455183 2001 ntBASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCSER1Q9C0I3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 AC135776.1-201ENST00000319817 2481 ntBASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCSER1Q9C0I3 MIR149-201ENST00000384879 89 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms