Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
HERPUD2Q9BSE4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.27■□□□□ 0.68
HERPUD2Q9BSE4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.27■□□□□ 0.68
HERPUD2Q9BSE4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HERPUD2Q9BSE4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.27■□□□□ 0.68
HERPUD2Q9BSE4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.27■□□□□ 0.68
HERPUD2Q9BSE4 SLC25A1P4-201ENST00000567977 778 ntBASIC19.27■□□□□ 0.68
HERPUD2Q9BSE4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HERPUD2Q9BSE4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HERPUD2Q9BSE4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
HERPUD2Q9BSE4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HERPUD2Q9BSE4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HERPUD2Q9BSE4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HERPUD2Q9BSE4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 MIR4785-201ENST00000585005 73 ntBASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 REXO1L10P-201ENST00000615707 1290 ntBASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 REXO1L12P-201ENST00000622156 912 ntBASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HERPUD2Q9BSE4 KRT17P2-201ENST00000300992 1314 ntBASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 MIR564-202ENST00000385049 94 ntBASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HERPUD2Q9BSE4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 MYC-208ENST00000641036 567 ntBASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HERPUD2Q9BSE4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms