Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC24.69■■□□□ 1.54
ABCA3Q99758 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.69■■□□□ 1.54
ABCA3Q99758 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC24.69■■□□□ 1.54
ABCA3Q99758 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC24.69■■□□□ 1.54
ABCA3Q99758 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ABCA3Q99758 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ABCA3Q99758 UROS-202ENST00000368778 1556 ntTSL 2 BASIC24.68■■□□□ 1.54
ABCA3Q99758 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ABCA3Q99758 AP006288.1-201ENST00000446065 395 ntBASIC24.68■■□□□ 1.54
ABCA3Q99758 AC009533.2-201ENST00000543664 586 ntBASIC24.68■■□□□ 1.54
ABCA3Q99758 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC24.68■■□□□ 1.54
ABCA3Q99758 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC24.68■■□□□ 1.54
ABCA3Q99758 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ABCA3Q99758 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
ABCA3Q99758 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 AC092667.1-201ENST00000434301 2586 ntBASIC24.67■■□□□ 1.54
ABCA3Q99758 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
ABCA3Q99758 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC24.67■■□□□ 1.54
ABCA3Q99758 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC24.67■■□□□ 1.54
ABCA3Q99758 KIRREL3-AS3-201ENST00000404882 831 ntBASIC24.67■■□□□ 1.54
ABCA3Q99758 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC24.67■■□□□ 1.54
ABCA3Q99758 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.67■■□□□ 1.54
ABCA3Q99758 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
ABCA3Q99758 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ABCA3Q99758 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC24.66■■□□□ 1.54
ABCA3Q99758 RPS8P6-201ENST00000426177 609 ntBASIC24.66■■□□□ 1.54
ABCA3Q99758 METTL21AP1-201ENST00000438852 635 ntBASIC24.66■■□□□ 1.54
ABCA3Q99758 DNAJB3-201ENST00000446806 729 ntBASIC24.66■■□□□ 1.54
ABCA3Q99758 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC24.66■■□□□ 1.54
ABCA3Q99758 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
ABCA3Q99758 AC011467.2-201ENST00000598425 242 ntBASIC24.66■■□□□ 1.54
ABCA3Q99758 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ABCA3Q99758 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC24.66■■□□□ 1.54
ABCA3Q99758 AC134684.3-201ENST00000641758 218 ntBASIC24.66■■□□□ 1.54
ABCA3Q99758 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCA3Q99758 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCA3Q99758 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCA3Q99758 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ABCA3Q99758 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCA3Q99758 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCA3Q99758 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCA3Q99758 IMP4-203ENST00000409935 958 ntTSL 5 BASIC24.66■■□□□ 1.54
ABCA3Q99758 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC24.66■■□□□ 1.54
ABCA3Q99758 ABCD1P5-201ENST00000445663 754 ntBASIC24.66■■□□□ 1.54
ABCA3Q99758 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC24.66■■□□□ 1.54
ABCA3Q99758 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC24.66■■□□□ 1.54
ABCA3Q99758 AP002414.3-201ENST00000589352 1468 ntBASIC24.66■■□□□ 1.54
ABCA3Q99758 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.66■■□□□ 1.54
ABCA3Q99758 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
ABCA3Q99758 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
ABCA3Q99758 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCA3Q99758 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCA3Q99758 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCA3Q99758 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC24.65■■□□□ 1.54
ABCA3Q99758 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCA3Q99758 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ABCA3Q99758 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.64■■□□□ 1.54
ABCA3Q99758 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.64■■□□□ 1.54
ABCA3Q99758 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
ABCA3Q99758 AL024508.2-201ENST00000607749 1894 ntBASIC24.64■■□□□ 1.54
ABCA3Q99758 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ABCA3Q99758 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ABCA3Q99758 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC24.64■■□□□ 1.54
ABCA3Q99758 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC24.64■■□□□ 1.54
ABCA3Q99758 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC24.64■■□□□ 1.54
ABCA3Q99758 AC002347.1-201ENST00000569543 541 ntBASIC24.64■■□□□ 1.54
ABCA3Q99758 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
ABCA3Q99758 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC24.64■■□□□ 1.53
ABCA3Q99758 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
ABCA3Q99758 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
ABCA3Q99758 FP475955.4-201ENST00000623131 1990 ntBASIC24.64■■□□□ 1.53
ABCA3Q99758 HLA-J-201ENST00000462773 1622 ntBASIC24.64■■□□□ 1.53
ABCA3Q99758 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
ABCA3Q99758 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ABCA3Q99758 KRT18P3-201ENST00000451602 1288 ntBASIC24.64■■□□□ 1.53
ABCA3Q99758 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCA3Q99758 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
ABCA3Q99758 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ABCA3Q99758 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
ABCA3Q99758 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
ABCA3Q99758 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ABCA3Q99758 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
ABCA3Q99758 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
ABCA3Q99758 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms