Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.73■□□□□ 0.27
SPENQ96T58 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.73■□□□□ 0.27
SPENQ96T58 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.73■□□□□ 0.27
SPENQ96T58 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SPENQ96T58 AC012640.2-201ENST00000561606 901 ntBASIC16.73■□□□□ 0.27
SPENQ96T58 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SPENQ96T58 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.73■□□□□ 0.27
SPENQ96T58 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.73■□□□□ 0.27
SPENQ96T58 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.73■□□□□ 0.27
SPENQ96T58 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.73■□□□□ 0.27
SPENQ96T58 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.73■□□□□ 0.27
SPENQ96T58 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SPENQ96T58 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPENQ96T58 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SPENQ96T58 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.72■□□□□ 0.27
SPENQ96T58 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.72■□□□□ 0.27
SPENQ96T58 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
SPENQ96T58 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.72■□□□□ 0.27
SPENQ96T58 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.72■□□□□ 0.27
SPENQ96T58 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SPENQ96T58 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.72■□□□□ 0.27
SPENQ96T58 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SPENQ96T58 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
SPENQ96T58 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.72■□□□□ 0.27
SPENQ96T58 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.72■□□□□ 0.27
SPENQ96T58 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.72■□□□□ 0.27
SPENQ96T58 AC064862.7-201ENST00000604520 867 ntBASIC16.72■□□□□ 0.27
SPENQ96T58 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.72■□□□□ 0.27
SPENQ96T58 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SPENQ96T58 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.72■□□□□ 0.27
SPENQ96T58 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.72■□□□□ 0.27
SPENQ96T58 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SPENQ96T58 GPR32P1-201ENST00000601788 811 ntBASIC16.72■□□□□ 0.27
SPENQ96T58 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPENQ96T58 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SPENQ96T58 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.71■□□□□ 0.27
SPENQ96T58 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SPENQ96T58 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.71■□□□□ 0.27
SPENQ96T58 RPL13AP23-201ENST00000480739 586 ntBASIC16.71■□□□□ 0.27
SPENQ96T58 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.71■□□□□ 0.27
SPENQ96T58 AC027796.2-201ENST00000575326 344 ntBASIC16.71■□□□□ 0.27
SPENQ96T58 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.71■□□□□ 0.27
SPENQ96T58 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.71■□□□□ 0.27
SPENQ96T58 FAM215A-202ENST00000632077 792 ntBASIC16.71■□□□□ 0.27
SPENQ96T58 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SPENQ96T58 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 AC073130.3-201ENST00000624389 2278 ntBASIC16.71■□□□□ 0.27
SPENQ96T58 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.71■□□□□ 0.27
SPENQ96T58 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SPENQ96T58 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.71■□□□□ 0.27
SPENQ96T58 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SPENQ96T58 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SPENQ96T58 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 AC034105.1-201ENST00000563488 319 ntBASIC16.71■□□□□ 0.27
SPENQ96T58 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.71■□□□□ 0.27
SPENQ96T58 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SPENQ96T58 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.71■□□□□ 0.27
SPENQ96T58 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SPENQ96T58 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPENQ96T58 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPENQ96T58 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPENQ96T58 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SPENQ96T58 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SPENQ96T58 AC006333.2-201ENST00000607957 2099 ntBASIC16.7■□□□□ 0.26
SPENQ96T58 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPENQ96T58 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPENQ96T58 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.7■□□□□ 0.26
SPENQ96T58 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPENQ96T58 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SPENQ96T58 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.7■□□□□ 0.26
SPENQ96T58 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SPENQ96T58 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms