Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 AL645929.1-201ENST00000420084 975 ntBASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP1Q96SZ6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 AL163051.1-201ENST00000569214 1512 ntBASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 AC079602.3-201ENST00000623931 403 ntBASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP1Q96SZ6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP1Q96SZ6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 AC093525.10-201ENST00000625130 1569 ntBASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 MIR662-201ENST00000384847 95 ntBASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 MIR149-201ENST00000384879 89 ntBASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDK5RAP1Q96SZ6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms