Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 SLC25A24-204ENST00000569674 2357 ntBASIC22.69■■□□□ 1.22
CNKSR1Q969H4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.69■■□□□ 1.22
CNKSR1Q969H4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CNKSR1Q969H4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 TP73-AS1-210ENST00000637775 1455 ntBASIC22.68■■□□□ 1.22
CNKSR1Q969H4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.68■■□□□ 1.22
CNKSR1Q969H4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 FP475955.4-201ENST00000623131 1990 ntBASIC22.67■■□□□ 1.22
CNKSR1Q969H4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNKSR1Q969H4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 AL357033.4-201ENST00000617703 1807 ntBASIC22.66■■□□□ 1.22
CNKSR1Q969H4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 AC113404.2-201ENST00000507884 177 ntBASIC22.66■■□□□ 1.22
CNKSR1Q969H4 PGAM5P1-201ENST00000518923 814 ntBASIC22.66■■□□□ 1.22
CNKSR1Q969H4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 AC145285.3-201ENST00000564603 959 ntBASIC22.66■■□□□ 1.22
CNKSR1Q969H4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CNKSR1Q969H4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 LINC01521-201ENST00000504184 1943 ntBASIC22.65■■□□□ 1.22
CNKSR1Q969H4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 AC005336.2-201ENST00000593183 939 ntBASIC22.65■■□□□ 1.22
CNKSR1Q969H4 AC008687.5-201ENST00000593746 558 ntBASIC22.65■■□□□ 1.22
CNKSR1Q969H4 AL691403.2-201ENST00000618460 490 ntBASIC22.65■■□□□ 1.22
CNKSR1Q969H4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNKSR1Q969H4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms