Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 RPL13AP23-201ENST00000480739 586 ntBASIC23.7■■□□□ 1.38
SMARCC1Q92922 AC073648.2-201ENST00000510116 352 ntBASIC23.7■■□□□ 1.38
SMARCC1Q92922 KRT18P41-201ENST00000518924 1277 ntBASIC23.7■■□□□ 1.38
SMARCC1Q92922 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 RPL18-209ENST00000550645 463 ntTSL 5 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 RPL18-214ENST00000552588 559 ntTSL 3 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 MIR7706-201ENST00000613747 67 ntBASIC23.7■■□□□ 1.38
SMARCC1Q92922 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.7■■□□□ 1.38
SMARCC1Q92922 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SMARCC1Q92922 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC1Q92922 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC1Q92922 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC1Q92922 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC1Q92922 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC1Q92922 FABP5-202ENST00000396359 986 ntTSL 5 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 RBM17P3-201ENST00000417687 1192 ntBASIC23.69■■□□□ 1.38
SMARCC1Q92922 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 SCARNA2-201ENST00000458748 420 ntBASIC23.69■■□□□ 1.38
SMARCC1Q92922 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 AC113404.2-201ENST00000507884 177 ntBASIC23.69■■□□□ 1.38
SMARCC1Q92922 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 AC008687.5-201ENST00000593746 558 ntBASIC23.69■■□□□ 1.38
SMARCC1Q92922 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 FAM215A-202ENST00000632077 792 ntBASIC23.69■■□□□ 1.38
SMARCC1Q92922 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC1Q92922 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SMARCC1Q92922 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
SMARCC1Q92922 AL163051.1-201ENST00000569214 1512 ntBASIC23.69■■□□□ 1.38
SMARCC1Q92922 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC1Q92922 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC1Q92922 AL357033.4-201ENST00000617703 1807 ntBASIC23.68■■□□□ 1.38
SMARCC1Q92922 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC1Q92922 RCN1P2-201ENST00000398357 915 ntBASIC23.68■■□□□ 1.38
SMARCC1Q92922 FGFR3P6-201ENST00000457012 610 ntBASIC23.68■■□□□ 1.38
SMARCC1Q92922 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 AL049840.3-201ENST00000602669 611 ntBASIC23.68■■□□□ 1.38
SMARCC1Q92922 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.68■■□□□ 1.38
SMARCC1Q92922 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SMARCC1Q92922 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC1Q92922 ZNF259P1-201ENST00000407656 1365 ntBASIC23.67■■□□□ 1.38
SMARCC1Q92922 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC1Q92922 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC1Q92922 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 BX842568.4-201ENST00000421222 227 ntBASIC23.67■■□□□ 1.38
SMARCC1Q92922 AC092183.1-201ENST00000469884 875 ntBASIC23.67■■□□□ 1.38
SMARCC1Q92922 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC1Q92922 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.67■■□□□ 1.38
SMARCC1Q92922 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC1Q92922 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC1Q92922 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SMARCC1Q92922 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC1Q92922 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SMARCC1Q92922 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC1Q92922 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
SMARCC1Q92922 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC1Q92922 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC1Q92922 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SMARCC1Q92922 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms