Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 AC009533.2-201ENST00000543664 586 ntBASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 AC112482.1-201ENST00000492080 688 ntBASIC28.18■■■□□ 2.1
ABCA9Q8IUA7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 AC007375.3-201ENST00000600936 2314 ntBASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 AC007967.2-201ENST00000432613 625 ntBASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 AC002347.1-201ENST00000569543 541 ntBASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ABCA9Q8IUA7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 COA5-202ENST00000409997 557 ntTSL 4 BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC28.16■■■□□ 2.1
ABCA9Q8IUA7 HEIH-201ENST00000623091 1652 ntBASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 RPS8P6-201ENST00000426177 609 ntBASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ABCA9Q8IUA7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA9Q8IUA7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC28.14■■■□□ 2.1
ABCA9Q8IUA7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA9Q8IUA7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA9Q8IUA7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ABCA9Q8IUA7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC28.14■■■□□ 2.09
ABCA9Q8IUA7 RNA5SP416-201ENST00000516838 111 ntBASIC28.14■■■□□ 2.09
ABCA9Q8IUA7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC28.14■■■□□ 2.09
ABCA9Q8IUA7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC28.14■■■□□ 2.09
ABCA9Q8IUA7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
ABCA9Q8IUA7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
ABCA9Q8IUA7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 AP002414.3-201ENST00000589352 1468 ntBASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 AC107918.4-202ENST00000641623 219 ntBASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ABCA9Q8IUA7 AC125634.1-201ENST00000438758 1403 ntBASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 UNC93B6-202ENST00000528242 690 ntBASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms