Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMEM88Q6PEY1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TMEM88Q6PEY1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 KRT18P61-201ENST00000585825 1298 ntBASIC15.03■□□□□ -0
TMEM88Q6PEY1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM88Q6PEY1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
TMEM88Q6PEY1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM88Q6PEY1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM88Q6PEY1 LINC02199-201ENST00000506655 2702 ntBASIC15.02■□□□□ -0
TMEM88Q6PEY1 AP004607.4-201ENST00000530158 1459 ntBASIC15.02■□□□□ -0
TMEM88Q6PEY1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM88Q6PEY1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM88Q6PEY1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM88Q6PEY1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM88Q6PEY1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM88Q6PEY1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 AC137761.2-201ENST00000561729 223 ntBASIC15.02■□□□□ -0
TMEM88Q6PEY1 AC145350.3-201ENST00000569033 163 ntBASIC15.02■□□□□ -0
TMEM88Q6PEY1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.02■□□□□ -0
TMEM88Q6PEY1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 AL162741.1-201ENST00000565563 1558 ntBASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM88Q6PEY1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 KRT87P-202ENST00000534226 1464 ntBASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.01□□□□□ -0.01
TMEM88Q6PEY1 KRT19P1-201ENST00000405746 1186 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms