Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 Z98044.1-201ENST00000632503 1764 ntBASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 HEIH-201ENST00000623091 1652 ntBASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 AC005332.3-201ENST00000589904 676 ntBASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 AL390719.2-201ENST00000606993 987 ntBASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 AL691432.3-201ENST00000621860 400 ntBASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC62Q6P9F0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 KRT18P1-202ENST00000452408 1331 ntBASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 AL357033.4-201ENST00000617703 1807 ntBASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 NUS1P1-201ENST00000446295 882 ntBASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 PRELID1P1-202ENST00000567272 903 ntBASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC62Q6P9F0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 AP003733.1-201ENST00000491725 852 ntBASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC62Q6P9F0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 MTMR9LP-203ENST00000426597 1545 ntBASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 AC138932.1-201ENST00000534164 6830 ntBASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 UNC93B7-201ENST00000509439 705 ntBASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms