Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC38Q5VT99 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 ESPNP-201ENST00000270691 2015 ntBASIC19.29■□□□□ 0.68
LRRC38Q5VT99 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 KRT8P7-201ENST00000533003 1432 ntBASIC19.29■□□□□ 0.68
LRRC38Q5VT99 HOXB1-202ENST00000577092 1414 ntBASIC19.29■□□□□ 0.68
LRRC38Q5VT99 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 UNC93B2-201ENST00000285383 730 ntBASIC19.29■□□□□ 0.68
LRRC38Q5VT99 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 TSPY17P-201ENST00000450329 467 ntBASIC19.29■□□□□ 0.68
LRRC38Q5VT99 RBM17P1-201ENST00000453646 1190 ntBASIC19.29■□□□□ 0.68
LRRC38Q5VT99 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 AL353719.1-201ENST00000566847 864 ntBASIC19.29■□□□□ 0.68
LRRC38Q5VT99 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC38Q5VT99 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 AC036111.1-201ENST00000533973 1582 ntBASIC19.28■□□□□ 0.68
LRRC38Q5VT99 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 MIR4785-201ENST00000585005 73 ntBASIC19.28■□□□□ 0.68
LRRC38Q5VT99 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC38Q5VT99 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.27■□□□□ 0.68
LRRC38Q5VT99 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 FITM1-202ENST00000559294 800 ntBASIC19.27■□□□□ 0.68
LRRC38Q5VT99 WWOX-216ENST00000569818 525 ntBASIC19.27■□□□□ 0.68
LRRC38Q5VT99 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC38Q5VT99 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC38Q5VT99 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
LRRC38Q5VT99 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC38Q5VT99 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
LRRC38Q5VT99 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
LRRC38Q5VT99 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC38Q5VT99 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC38Q5VT99 AC092338.2-201ENST00000568827 1415 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms