Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 KRT18P23-201ENST00000435622 1283 ntBASIC16.6■□□□□ 0.25
H3F3AP84243 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.6■□□□□ 0.25
H3F3AP84243 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.6■□□□□ 0.25
H3F3AP84243 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
H3F3AP84243 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.6■□□□□ 0.25
H3F3AP84243 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.6■□□□□ 0.25
H3F3AP84243 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.6■□□□□ 0.25
H3F3AP84243 AC112497.1-201ENST00000624824 639 ntBASIC16.6■□□□□ 0.25
H3F3AP84243 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.6■□□□□ 0.25
H3F3AP84243 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
H3F3AP84243 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.6■□□□□ 0.25
H3F3AP84243 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.6■□□□□ 0.25
H3F3AP84243 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
H3F3AP84243 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.6■□□□□ 0.25
H3F3AP84243 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
H3F3AP84243 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.59■□□□□ 0.25
H3F3AP84243 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.59■□□□□ 0.25
H3F3AP84243 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.59■□□□□ 0.25
H3F3AP84243 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.59■□□□□ 0.25
H3F3AP84243 BX664615.1-201ENST00000443558 458 ntBASIC16.59■□□□□ 0.25
H3F3AP84243 ATP5G1P1-201ENST00000448724 379 ntBASIC16.59■□□□□ 0.25
H3F3AP84243 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.59■□□□□ 0.25
H3F3AP84243 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
H3F3AP84243 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 AC104390.1-201ENST00000555663 520 ntBASIC16.59■□□□□ 0.25
H3F3AP84243 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.59■□□□□ 0.25
H3F3AP84243 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.59■□□□□ 0.25
H3F3AP84243 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.59■□□□□ 0.25
H3F3AP84243 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 AC092865.7-201ENST00000641832 219 ntBASIC16.59■□□□□ 0.25
H3F3AP84243 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
H3F3AP84243 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
H3F3AP84243 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
H3F3AP84243 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.59■□□□□ 0.25
H3F3AP84243 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 MYLKP1-201ENST00000509077 1580 ntBASIC16.59■□□□□ 0.25
H3F3AP84243 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H3F3AP84243 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
H3F3AP84243 AC073592.3-201ENST00000625118 1834 ntBASIC16.59■□□□□ 0.25
H3F3AP84243 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3AP84243 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3AP84243 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3AP84243 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.58■□□□□ 0.25
H3F3AP84243 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3AP84243 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3AP84243 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3AP84243 WIZP1-201ENST00000531444 2299 ntBASIC16.58■□□□□ 0.25
H3F3AP84243 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
H3F3AP84243 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
H3F3AP84243 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
H3F3AP84243 RCN1P1-201ENST00000400413 996 ntBASIC16.58■□□□□ 0.24
H3F3AP84243 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.58■□□□□ 0.24
H3F3AP84243 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.58■□□□□ 0.24
H3F3AP84243 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.58■□□□□ 0.24
H3F3AP84243 MIR3180-4-201ENST00000582223 153 ntBASIC16.58■□□□□ 0.24
H3F3AP84243 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
H3F3AP84243 AL031432.5-201ENST00000641059 760 ntBASIC16.58■□□□□ 0.24
H3F3AP84243 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.58■□□□□ 0.24
H3F3AP84243 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
H3F3AP84243 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
H3F3AP84243 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms