Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNA1P78396 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.11■□□□□ 0.97
CCNA1P78396 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCNA1P78396 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNA1P78396 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNA1P78396 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNA1P78396 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNA1P78396 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNA1P78396 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNA1P78396 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNA1P78396 KRT8P50-201ENST00000562022 1438 ntBASIC21.11■□□□□ 0.97
CCNA1P78396 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNA1P78396 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNA1P78396 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNA1P78396 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNA1P78396 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNA1P78396 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNA1P78396 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.1■□□□□ 0.97
CCNA1P78396 AC120114.3-201ENST00000611923 658 ntBASIC21.1■□□□□ 0.97
CCNA1P78396 AC006538.3-201ENST00000612495 578 ntBASIC21.1■□□□□ 0.97
CCNA1P78396 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 AC125437.2-201ENST00000625180 2167 ntBASIC21.1■□□□□ 0.97
CCNA1P78396 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNA1P78396 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNA1P78396 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNA1P78396 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CCNA1P78396 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNA1P78396 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CCNA1P78396 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNA1P78396 AL590627.1-203ENST00000421194 1026 ntBASIC21.09■□□□□ 0.97
CCNA1P78396 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.09■□□□□ 0.97
CCNA1P78396 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.09■□□□□ 0.97
CCNA1P78396 AF238378.1-201ENST00000526806 358 ntBASIC21.09■□□□□ 0.97
CCNA1P78396 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.09■□□□□ 0.97
CCNA1P78396 AC008687.5-201ENST00000593746 558 ntBASIC21.09■□□□□ 0.97
CCNA1P78396 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
CCNA1P78396 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNA1P78396 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.09■□□□□ 0.97
CCNA1P78396 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCNA1P78396 AL357033.4-201ENST00000617703 1807 ntBASIC21.08■□□□□ 0.97
CCNA1P78396 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.08■□□□□ 0.97
CCNA1P78396 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNA1P78396 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCNA1P78396 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCNA1P78396 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNA1P78396 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNA1P78396 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCNA1P78396 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCNA1P78396 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.08■□□□□ 0.97
CCNA1P78396 AC091607.1-201ENST00000490318 1060 ntBASIC21.08■□□□□ 0.97
CCNA1P78396 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCNA1P78396 KRT18P41-201ENST00000518924 1277 ntBASIC21.08■□□□□ 0.97
CCNA1P78396 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCNA1P78396 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.08■□□□□ 0.97
CCNA1P78396 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CCNA1P78396 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCNA1P78396 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCNA1P78396 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
CCNA1P78396 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CCNA1P78396 HEIH-201ENST00000623091 1652 ntBASIC21.08■□□□□ 0.96
CCNA1P78396 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCNA1P78396 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.08■□□□□ 0.96
CCNA1P78396 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNA1P78396 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNA1P78396 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNA1P78396 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
CCNA1P78396 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNA1P78396 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNA1P78396 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNA1P78396 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNA1P78396 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCNA1P78396 TSPY12P-201ENST00000421279 868 ntBASIC21.07■□□□□ 0.96
CCNA1P78396 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCNA1P78396 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNA1P78396 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCNA1P78396 AP001005.1-201ENST00000571755 1248 ntBASIC21.07■□□□□ 0.96
CCNA1P78396 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNA1P78396 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.07■□□□□ 0.96
CCNA1P78396 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.07■□□□□ 0.96
CCNA1P78396 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.07■□□□□ 0.96
CCNA1P78396 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms