Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.9■□□□□ 0.78
MCCD1P59942 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.9■□□□□ 0.78
MCCD1P59942 LINC01023-201ENST00000606054 436 ntBASIC19.9■□□□□ 0.78
MCCD1P59942 NEFHP1-201ENST00000412845 2629 ntBASIC19.9■□□□□ 0.78
MCCD1P59942 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MCCD1P59942 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
MCCD1P59942 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MCCD1P59942 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MCCD1P59942 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.9■□□□□ 0.78
MCCD1P59942 GMCL1P1-201ENST00000463439 1581 ntBASIC19.9■□□□□ 0.78
MCCD1P59942 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MCCD1P59942 LINC01126-201ENST00000623515 1646 ntBASIC19.9■□□□□ 0.78
MCCD1P59942 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.9■□□□□ 0.78
MCCD1P59942 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MCCD1P59942 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MCCD1P59942 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MCCD1P59942 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MCCD1P59942 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MCCD1P59942 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MCCD1P59942 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
MCCD1P59942 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.89■□□□□ 0.77
MCCD1P59942 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
MCCD1P59942 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MCCD1P59942 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MCCD1P59942 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.89■□□□□ 0.77
MCCD1P59942 COX11P1-201ENST00000489116 835 ntBASIC19.89■□□□□ 0.77
MCCD1P59942 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MCCD1P59942 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MCCD1P59942 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.89■□□□□ 0.77
MCCD1P59942 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.89■□□□□ 0.77
MCCD1P59942 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.89■□□□□ 0.77
MCCD1P59942 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MCCD1P59942 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MCCD1P59942 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MCCD1P59942 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.88■□□□□ 0.77
MCCD1P59942 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.88■□□□□ 0.77
MCCD1P59942 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MCCD1P59942 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.88■□□□□ 0.77
MCCD1P59942 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MCCD1P59942 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 AC005521.1-201ENST00000393351 872 ntBASIC19.88■□□□□ 0.77
MCCD1P59942 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.88■□□□□ 0.77
MCCD1P59942 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.88■□□□□ 0.77
MCCD1P59942 AL441883.1-201ENST00000566170 1045 ntBASIC19.88■□□□□ 0.77
MCCD1P59942 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MCCD1P59942 AC011558.1-201ENST00000623459 338 ntBASIC19.88■□□□□ 0.77
MCCD1P59942 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.88■□□□□ 0.77
MCCD1P59942 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MCCD1P59942 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MCCD1P59942 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.88■□□□□ 0.77
MCCD1P59942 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.88■□□□□ 0.77
MCCD1P59942 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.88■□□□□ 0.77
MCCD1P59942 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.88■□□□□ 0.77
MCCD1P59942 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MCCD1P59942 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.87■□□□□ 0.77
MCCD1P59942 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.87■□□□□ 0.77
MCCD1P59942 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 AC092865.7-201ENST00000641832 219 ntBASIC19.87■□□□□ 0.77
MCCD1P59942 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
MCCD1P59942 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MCCD1P59942 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MCCD1P59942 PHGDH-209ENST00000641074 1780 ntBASIC19.87■□□□□ 0.77
MCCD1P59942 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.87■□□□□ 0.77
MCCD1P59942 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.87■□□□□ 0.77
MCCD1P59942 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.87■□□□□ 0.77
MCCD1P59942 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MCCD1P59942 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MCCD1P59942 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MCCD1P59942 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MCCD1P59942 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.86■□□□□ 0.77
MCCD1P59942 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
MCCD1P59942 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MCCD1P59942 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.86■□□□□ 0.77
MCCD1P59942 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.86■□□□□ 0.77
MCCD1P59942 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms