Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
PDX1P52945 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.02■□□□□ 0.48
PDX1P52945 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PDX1P52945 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 HLA-F-220ENST00000434407 884 ntBASIC18.02■□□□□ 0.48
PDX1P52945 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.02■□□□□ 0.48
PDX1P52945 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDX1P52945 BX276092.5-203ENST00000456199 560 ntBASIC18.02■□□□□ 0.48
PDX1P52945 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 KRT8P3-201ENST00000519669 1449 ntBASIC18.02■□□□□ 0.48
PDX1P52945 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.02■□□□□ 0.48
PDX1P52945 RN7SL510P-201ENST00000581311 263 ntBASIC18.02■□□□□ 0.48
PDX1P52945 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDX1P52945 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PDX1P52945 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDX1P52945 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
PDX1P52945 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDX1P52945 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDX1P52945 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDX1P52945 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDX1P52945 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.02■□□□□ 0.47
PDX1P52945 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDX1P52945 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PDX1P52945 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDX1P52945 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDX1P52945 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.01■□□□□ 0.47
PDX1P52945 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDX1P52945 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PDX1P52945 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.01■□□□□ 0.47
PDX1P52945 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
PDX1P52945 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.01■□□□□ 0.47
PDX1P52945 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDX1P52945 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDX1P52945 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 BX323043.1-201ENST00000641006 1765 ntBASIC18.01■□□□□ 0.47
PDX1P52945 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PDX1P52945 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.01■□□□□ 0.47
PDX1P52945 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDX1P52945 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PDX1P52945 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18■□□□□ 0.47
PDX1P52945 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18■□□□□ 0.47
PDX1P52945 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18■□□□□ 0.47
PDX1P52945 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18■□□□□ 0.47
PDX1P52945 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18■□□□□ 0.47
PDX1P52945 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18■□□□□ 0.47
PDX1P52945 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PDX1P52945 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18■□□□□ 0.47
PDX1P52945 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18■□□□□ 0.47
PDX1P52945 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18■□□□□ 0.47
PDX1P52945 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18■□□□□ 0.47
PDX1P52945 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18■□□□□ 0.47
PDX1P52945 AP002414.4-201ENST00000589764 1148 ntBASIC18■□□□□ 0.47
PDX1P52945 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18■□□□□ 0.47
PDX1P52945 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18■□□□□ 0.47
PDX1P52945 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PDX1P52945 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18■□□□□ 0.47
PDX1P52945 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms