Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCNKAP51800 SPDYE15P-201ENST00000424157 909 ntBASIC18.22■□□□□ 0.51
CLCNKAP51800 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CLCNKAP51800 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.22■□□□□ 0.51
CLCNKAP51800 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.22■□□□□ 0.51
CLCNKAP51800 MIR3917-201ENST00000580971 93 ntBASIC18.22■□□□□ 0.51
CLCNKAP51800 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CLCNKAP51800 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCNKAP51800 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCNKAP51800 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.22■□□□□ 0.51
CLCNKAP51800 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLCNKAP51800 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CLCNKAP51800 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCNKAP51800 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCNKAP51800 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCNKAP51800 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLCNKAP51800 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CLCNKAP51800 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCNKAP51800 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCNKAP51800 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.21■□□□□ 0.51
CLCNKAP51800 AC112907.2-201ENST00000448639 330 ntBASIC18.21■□□□□ 0.51
CLCNKAP51800 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCNKAP51800 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.21■□□□□ 0.51
CLCNKAP51800 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.21■□□□□ 0.51
CLCNKAP51800 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.21■□□□□ 0.51
CLCNKAP51800 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCNKAP51800 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCNKAP51800 Z98044.1-201ENST00000632503 1764 ntBASIC18.21■□□□□ 0.51
CLCNKAP51800 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCNKAP51800 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCNKAP51800 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCNKAP51800 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.21■□□□□ 0.5
CLCNKAP51800 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLCNKAP51800 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCNKAP51800 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCNKAP51800 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCNKAP51800 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCNKAP51800 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CLCNKAP51800 AL136038.3-201ENST00000561909 1096 ntBASIC18.2■□□□□ 0.5
CLCNKAP51800 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCNKAP51800 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCNKAP51800 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLCNKAP51800 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCNKAP51800 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCNKAP51800 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCNKAP51800 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCNKAP51800 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCNKAP51800 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCNKAP51800 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCNKAP51800 FAM86EP-206ENST00000510506 987 ntBASIC18.19■□□□□ 0.5
CLCNKAP51800 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLCNKAP51800 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCNKAP51800 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.19■□□□□ 0.5
CLCNKAP51800 AC091076.1-201ENST00000610741 619 ntBASIC18.19■□□□□ 0.5
CLCNKAP51800 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCNKAP51800 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCNKAP51800 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCNKAP51800 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCNKAP51800 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCNKAP51800 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.18■□□□□ 0.5
CLCNKAP51800 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 HBZP1-201ENST00000354915 429 ntBASIC18.18■□□□□ 0.5
CLCNKAP51800 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
CLCNKAP51800 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCNKAP51800 ZNF444P1-201ENST00000559497 298 ntBASIC18.18■□□□□ 0.5
CLCNKAP51800 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms