Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BRCA2P51587 RPS2P1-201ENST00000434010 821 ntBASIC20.75■□□□□ 0.91
BRCA2P51587 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
BRCA2P51587 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCA2P51587 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.74■□□□□ 0.91
BRCA2P51587 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCA2P51587 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.74■□□□□ 0.91
BRCA2P51587 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.74■□□□□ 0.91
BRCA2P51587 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCA2P51587 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCA2P51587 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.74■□□□□ 0.91
BRCA2P51587 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
BRCA2P51587 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCA2P51587 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
BRCA2P51587 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.74■□□□□ 0.91
BRCA2P51587 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.74■□□□□ 0.91
BRCA2P51587 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCA2P51587 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BRCA2P51587 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRCA2P51587 LINC01006-201ENST00000333319 2292 ntBASIC20.74■□□□□ 0.91
BRCA2P51587 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.74■□□□□ 0.91
BRCA2P51587 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
BRCA2P51587 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.74■□□□□ 0.91
BRCA2P51587 AC239800.4-201ENST00000603712 296 ntBASIC20.74■□□□□ 0.91
BRCA2P51587 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCA2P51587 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCA2P51587 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
BRCA2P51587 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
BRCA2P51587 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCA2P51587 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCA2P51587 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
BRCA2P51587 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.73■□□□□ 0.91
BRCA2P51587 AC040169.1-201ENST00000565382 521 ntBASIC20.73■□□□□ 0.91
BRCA2P51587 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.73■□□□□ 0.91
BRCA2P51587 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCA2P51587 AC005082.1-201ENST00000413042 2259 ntBASIC20.73■□□□□ 0.91
BRCA2P51587 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
BRCA2P51587 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
BRCA2P51587 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.73■□□□□ 0.91
BRCA2P51587 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.73■□□□□ 0.91
BRCA2P51587 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRCA2P51587 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.73■□□□□ 0.91
BRCA2P51587 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRCA2P51587 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.73■□□□□ 0.91
BRCA2P51587 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
BRCA2P51587 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.72■□□□□ 0.91
BRCA2P51587 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.72■□□□□ 0.91
BRCA2P51587 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.72■□□□□ 0.91
BRCA2P51587 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCA2P51587 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCA2P51587 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCA2P51587 AP003733.1-201ENST00000491725 852 ntBASIC20.72■□□□□ 0.91
BRCA2P51587 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.72■□□□□ 0.91
BRCA2P51587 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
BRCA2P51587 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.72■□□□□ 0.91
BRCA2P51587 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCA2P51587 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 KRT8P7-201ENST00000533003 1432 ntBASIC20.72■□□□□ 0.91
BRCA2P51587 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCA2P51587 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.72■□□□□ 0.91
BRCA2P51587 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.72■□□□□ 0.91
BRCA2P51587 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRCA2P51587 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.72■□□□□ 0.91
BRCA2P51587 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
BRCA2P51587 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.71■□□□□ 0.91
BRCA2P51587 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.71■□□□□ 0.91
BRCA2P51587 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BRCA2P51587 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
BRCA2P51587 AP005117.1-201ENST00000584346 1413 ntBASIC20.71■□□□□ 0.91
BRCA2P51587 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.71■□□□□ 0.91
BRCA2P51587 AC002347.1-201ENST00000569543 541 ntBASIC20.71■□□□□ 0.91
BRCA2P51587 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
BRCA2P51587 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.71■□□□□ 0.91
BRCA2P51587 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.71■□□□□ 0.91
BRCA2P51587 COX20P2-201ENST00000452636 358 ntBASIC20.71■□□□□ 0.91
BRCA2P51587 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.71■□□□□ 0.91
BRCA2P51587 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.71■□□□□ 0.91
BRCA2P51587 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.71■□□□□ 0.91
BRCA2P51587 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.71■□□□□ 0.91
BRCA2P51587 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRCA2P51587 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms