Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 KRT8P50-201ENST00000562022 1438 ntBASIC21.16■□□□□ 0.98
TM4SF4P48230 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF4P48230 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF4P48230 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.16■□□□□ 0.98
TM4SF4P48230 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.16■□□□□ 0.98
TM4SF4P48230 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.16■□□□□ 0.98
TM4SF4P48230 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
TM4SF4P48230 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
TM4SF4P48230 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.16■□□□□ 0.98
TM4SF4P48230 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF4P48230 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TM4SF4P48230 LINC01521-201ENST00000504184 1943 ntBASIC21.16■□□□□ 0.98
TM4SF4P48230 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF4P48230 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF4P48230 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.15■□□□□ 0.98
TM4SF4P48230 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF4P48230 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF4P48230 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF4P48230 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF4P48230 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.15■□□□□ 0.98
TM4SF4P48230 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.15■□□□□ 0.98
TM4SF4P48230 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.15■□□□□ 0.98
TM4SF4P48230 AC023274.1-201ENST00000418278 595 ntBASIC21.15■□□□□ 0.98
TM4SF4P48230 AC007967.2-201ENST00000432613 625 ntBASIC21.15■□□□□ 0.98
TM4SF4P48230 METTL21AP1-201ENST00000438852 635 ntBASIC21.15■□□□□ 0.98
TM4SF4P48230 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.15■□□□□ 0.98
TM4SF4P48230 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF4P48230 AC068587.9-201ENST00000641814 219 ntBASIC21.15■□□□□ 0.98
TM4SF4P48230 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF4P48230 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF4P48230 AC099778.1-201ENST00000568593 1911 ntBASIC21.15■□□□□ 0.98
TM4SF4P48230 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TM4SF4P48230 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.15■□□□□ 0.98
TM4SF4P48230 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TM4SF4P48230 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.14■□□□□ 0.98
TM4SF4P48230 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TM4SF4P48230 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TM4SF4P48230 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TM4SF4P48230 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.14■□□□□ 0.97
TM4SF4P48230 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
TM4SF4P48230 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF4P48230 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF4P48230 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF4P48230 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TM4SF4P48230 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TM4SF4P48230 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.14■□□□□ 0.97
TM4SF4P48230 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.14■□□□□ 0.97
TM4SF4P48230 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF4P48230 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF4P48230 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.14■□□□□ 0.97
TM4SF4P48230 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.14■□□□□ 0.97
TM4SF4P48230 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF4P48230 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF4P48230 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF4P48230 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.14■□□□□ 0.97
TM4SF4P48230 AC107918.4-202ENST00000641623 219 ntBASIC21.14■□□□□ 0.97
TM4SF4P48230 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.14■□□□□ 0.97
TM4SF4P48230 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.14■□□□□ 0.97
TM4SF4P48230 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF4P48230 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TM4SF4P48230 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF4P48230 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TM4SF4P48230 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TM4SF4P48230 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF4P48230 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF4P48230 AL139288.1-201ENST00000623748 933 ntBASIC21.13■□□□□ 0.97
TM4SF4P48230 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.13■□□□□ 0.97
TM4SF4P48230 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.13■□□□□ 0.97
TM4SF4P48230 AP002414.3-201ENST00000589352 1468 ntBASIC21.13■□□□□ 0.97
TM4SF4P48230 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TM4SF4P48230 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.12■□□□□ 0.97
TM4SF4P48230 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF4P48230 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF4P48230 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.12■□□□□ 0.97
TM4SF4P48230 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF4P48230 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC21.12■□□□□ 0.97
TM4SF4P48230 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.12■□□□□ 0.97
TM4SF4P48230 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF4P48230 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.12■□□□□ 0.97
TM4SF4P48230 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.12■□□□□ 0.97
TM4SF4P48230 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF4P48230 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.12■□□□□ 0.97
TM4SF4P48230 AC009947.1-201ENST00000444350 727 ntBASIC21.12■□□□□ 0.97
TM4SF4P48230 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.12■□□□□ 0.97
TM4SF4P48230 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.12■□□□□ 0.97
TM4SF4P48230 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.12■□□□□ 0.97
TM4SF4P48230 AL596442.2-201ENST00000610240 980 ntBASIC21.12■□□□□ 0.97
TM4SF4P48230 AL163051.1-201ENST00000569214 1512 ntBASIC21.12■□□□□ 0.97
TM4SF4P48230 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TM4SF4P48230 Z98044.1-201ENST00000632503 1764 ntBASIC21.12■□□□□ 0.97
TM4SF4P48230 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.12■□□□□ 0.97
TM4SF4P48230 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms