Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC141586.3-201ENST00000562166 1838 ntBASIC22.69■■□□□ 1.22
COL11A2P13942 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
COL11A2P13942 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL11A2P13942 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL11A2P13942 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.69■■□□□ 1.22
COL11A2P13942 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL11A2P13942 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
COL11A2P13942 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.68■■□□□ 1.22
COL11A2P13942 MED15P5-201ENST00000423150 992 ntBASIC22.68■■□□□ 1.22
COL11A2P13942 AC116407.3-201ENST00000623905 1129 ntBASIC22.68■■□□□ 1.22
COL11A2P13942 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.68■■□□□ 1.22
COL11A2P13942 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
COL11A2P13942 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.68■■□□□ 1.22
COL11A2P13942 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.68■■□□□ 1.22
COL11A2P13942 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.68■■□□□ 1.22
COL11A2P13942 AC005104.2-201ENST00000427818 678 ntBASIC22.68■■□□□ 1.22
COL11A2P13942 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.68■■□□□ 1.22
COL11A2P13942 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC22.68■■□□□ 1.22
COL11A2P13942 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.68■■□□□ 1.22
COL11A2P13942 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC22.68■■□□□ 1.22
COL11A2P13942 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL11A2P13942 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL11A2P13942 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL11A2P13942 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
COL11A2P13942 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL11A2P13942 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
COL11A2P13942 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.67■■□□□ 1.22
COL11A2P13942 RCN1P2-201ENST00000398357 915 ntBASIC22.67■■□□□ 1.22
COL11A2P13942 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL11A2P13942 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.67■■□□□ 1.22
COL11A2P13942 AC021087.4-201ENST00000563761 564 ntBASIC22.67■■□□□ 1.22
COL11A2P13942 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.67■■□□□ 1.22
COL11A2P13942 MTDHP3-201ENST00000594186 672 ntBASIC22.67■■□□□ 1.22
COL11A2P13942 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL11A2P13942 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL11A2P13942 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
COL11A2P13942 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
COL11A2P13942 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.67■■□□□ 1.22
COL11A2P13942 AL024508.2-201ENST00000607749 1894 ntBASIC22.66■■□□□ 1.22
COL11A2P13942 TP73-AS1-210ENST00000637775 1455 ntBASIC22.66■■□□□ 1.22
COL11A2P13942 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL11A2P13942 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.66■■□□□ 1.22
COL11A2P13942 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL11A2P13942 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL11A2P13942 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL11A2P13942 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL11A2P13942 PMS2P2-201ENST00000425039 1128 ntBASIC22.66■■□□□ 1.22
COL11A2P13942 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.66■■□□□ 1.22
COL11A2P13942 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.66■■□□□ 1.22
COL11A2P13942 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.66■■□□□ 1.22
COL11A2P13942 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.66■■□□□ 1.22
COL11A2P13942 AL691403.2-201ENST00000618460 490 ntBASIC22.66■■□□□ 1.22
COL11A2P13942 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.66■■□□□ 1.22
COL11A2P13942 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL11A2P13942 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.66■■□□□ 1.22
COL11A2P13942 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL11A2P13942 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.66■■□□□ 1.22
COL11A2P13942 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
COL11A2P13942 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.66■■□□□ 1.22
COL11A2P13942 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.66■■□□□ 1.22
COL11A2P13942 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL11A2P13942 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL11A2P13942 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
COL11A2P13942 MIR940-201ENST00000401276 94 ntBASIC22.65■■□□□ 1.22
COL11A2P13942 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.65■■□□□ 1.22
COL11A2P13942 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.65■■□□□ 1.22
COL11A2P13942 RPS2P1-201ENST00000434010 821 ntBASIC22.65■■□□□ 1.22
COL11A2P13942 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.65■■□□□ 1.22
COL11A2P13942 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL11A2P13942 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.65■■□□□ 1.22
COL11A2P13942 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL11A2P13942 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL11A2P13942 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL11A2P13942 INTS4P1-201ENST00000438455 1935 ntBASIC22.65■■□□□ 1.22
COL11A2P13942 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
COL11A2P13942 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL11A2P13942 AC104109.2-201ENST00000602919 1418 ntBASIC22.65■■□□□ 1.22
COL11A2P13942 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL11A2P13942 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
COL11A2P13942 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL11A2P13942 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.65■■□□□ 1.22
COL11A2P13942 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
COL11A2P13942 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
COL11A2P13942 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.65■■□□□ 1.22
COL11A2P13942 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL11A2P13942 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
COL11A2P13942 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.64■■□□□ 1.22
COL11A2P13942 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL11A2P13942 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL11A2P13942 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms