Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
COL1A2P08123 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.36■□□□□ 0.85
COL1A2P08123 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.36■□□□□ 0.85
COL1A2P08123 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
COL1A2P08123 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.35■□□□□ 0.85
COL1A2P08123 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.35■□□□□ 0.85
COL1A2P08123 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.35■□□□□ 0.85
COL1A2P08123 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.35■□□□□ 0.85
COL1A2P08123 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL1A2P08123 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.35■□□□□ 0.85
COL1A2P08123 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
COL1A2P08123 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.35■□□□□ 0.85
COL1A2P08123 MYLKP1-201ENST00000509077 1580 ntBASIC20.35■□□□□ 0.85
COL1A2P08123 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL1A2P08123 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
COL1A2P08123 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.35■□□□□ 0.85
COL1A2P08123 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL1A2P08123 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.34■□□□□ 0.85
COL1A2P08123 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
COL1A2P08123 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
COL1A2P08123 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 AC012615.1-201ENST00000565797 1299 ntBASIC20.34■□□□□ 0.85
COL1A2P08123 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.34■□□□□ 0.85
COL1A2P08123 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.34■□□□□ 0.85
COL1A2P08123 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
COL1A2P08123 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.34■□□□□ 0.85
COL1A2P08123 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.34■□□□□ 0.85
COL1A2P08123 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.34■□□□□ 0.85
COL1A2P08123 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.34■□□□□ 0.85
COL1A2P08123 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 AL353692.3-201ENST00000407031 1396 ntBASIC20.34■□□□□ 0.85
COL1A2P08123 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COL1A2P08123 NUS1P1-201ENST00000446295 882 ntBASIC20.34■□□□□ 0.85
COL1A2P08123 LINC00265-3P-201ENST00000447588 903 ntBASIC20.34■□□□□ 0.85
COL1A2P08123 TOB2P1-201ENST00000469761 992 ntBASIC20.34■□□□□ 0.85
COL1A2P08123 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 AC113404.2-201ENST00000507884 177 ntBASIC20.34■□□□□ 0.85
COL1A2P08123 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A2P08123 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A2P08123 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A2P08123 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A2P08123 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.34■□□□□ 0.85
COL1A2P08123 AL691432.3-201ENST00000621860 400 ntBASIC20.34■□□□□ 0.85
COL1A2P08123 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL1A2P08123 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A2P08123 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A2P08123 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A2P08123 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL1A2P08123 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COL1A2P08123 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.33■□□□□ 0.84
COL1A2P08123 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL1A2P08123 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL1A2P08123 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL1A2P08123 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL1A2P08123 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL1A2P08123 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.33■□□□□ 0.84
COL1A2P08123 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.33■□□□□ 0.84
COL1A2P08123 GUSBP12-201ENST00000513727 720 ntBASIC20.33■□□□□ 0.84
COL1A2P08123 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.33■□□□□ 0.84
COL1A2P08123 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.33■□□□□ 0.84
COL1A2P08123 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.33■□□□□ 0.84
COL1A2P08123 AL592071.1-201ENST00000611956 408 ntBASIC20.33■□□□□ 0.84
COL1A2P08123 IGHV3-41-201ENST00000613121 348 ntBASIC20.33■□□□□ 0.84
COL1A2P08123 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.32■□□□□ 0.84
COL1A2P08123 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.32■□□□□ 0.84
COL1A2P08123 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms