Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 INTS4P1-201ENST00000438455 1935 ntBASIC21.17■□□□□ 0.98
ALDH1A1P00352 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALDH1A1P00352 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALDH1A1P00352 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALDH1A1P00352 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 DNAJB3-202ENST00000449667 1266 ntBASIC21.16■□□□□ 0.98
ALDH1A1P00352 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 AC113404.2-201ENST00000507884 177 ntBASIC21.16■□□□□ 0.98
ALDH1A1P00352 SART3-203ENST00000546611 1184 ntBASIC21.16■□□□□ 0.98
ALDH1A1P00352 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALDH1A1P00352 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALDH1A1P00352 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.16■□□□□ 0.98
ALDH1A1P00352 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALDH1A1P00352 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALDH1A1P00352 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALDH1A1P00352 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ALDH1A1P00352 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.15■□□□□ 0.98
ALDH1A1P00352 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.15■□□□□ 0.98
ALDH1A1P00352 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ALDH1A1P00352 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.15■□□□□ 0.98
ALDH1A1P00352 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALDH1A1P00352 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALDH1A1P00352 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ALDH1A1P00352 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.15■□□□□ 0.98
ALDH1A1P00352 MTDHP5-201ENST00000598980 586 ntBASIC21.15■□□□□ 0.98
ALDH1A1P00352 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ALDH1A1P00352 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.15■□□□□ 0.98
ALDH1A1P00352 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALDH1A1P00352 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.15■□□□□ 0.98
ALDH1A1P00352 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ALDH1A1P00352 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ALDH1A1P00352 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.14■□□□□ 0.98
ALDH1A1P00352 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.14■□□□□ 0.98
ALDH1A1P00352 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ALDH1A1P00352 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ALDH1A1P00352 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.14■□□□□ 0.98
ALDH1A1P00352 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ALDH1A1P00352 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
ALDH1A1P00352 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ALDH1A1P00352 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ALDH1A1P00352 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.14■□□□□ 0.97
ALDH1A1P00352 ABCD1P5-201ENST00000445663 754 ntBASIC21.14■□□□□ 0.97
ALDH1A1P00352 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.14■□□□□ 0.97
ALDH1A1P00352 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.14■□□□□ 0.97
ALDH1A1P00352 AC008735.5-201ENST00000623544 497 ntBASIC21.14■□□□□ 0.97
ALDH1A1P00352 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ALDH1A1P00352 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.14■□□□□ 0.97
ALDH1A1P00352 AL356309.3-201ENST00000624132 1934 ntBASIC21.14■□□□□ 0.97
ALDH1A1P00352 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 AL391422.3-201ENST00000603791 2761 ntBASIC21.13■□□□□ 0.97
ALDH1A1P00352 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALDH1A1P00352 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ALDH1A1P00352 TEX21P-204ENST00000641479 1693 ntBASIC21.12■□□□□ 0.97
ALDH1A1P00352 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALDH1A1P00352 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALDH1A1P00352 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALDH1A1P00352 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALDH1A1P00352 AC211486.1-202ENST00000416371 468 ntBASIC21.12■□□□□ 0.97
ALDH1A1P00352 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 AP006288.1-201ENST00000446065 395 ntBASIC21.12■□□□□ 0.97
ALDH1A1P00352 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 AC211476.1-201ENST00000503899 468 ntBASIC21.12■□□□□ 0.97
ALDH1A1P00352 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ALDH1A1P00352 AC012640.2-201ENST00000561606 901 ntBASIC21.12■□□□□ 0.97
ALDH1A1P00352 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.12■□□□□ 0.97
ALDH1A1P00352 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ALDH1A1P00352 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms