Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TOP3BO95985 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TOP3BO95985 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.04■□□□□ 0.64
TOP3BO95985 AC093525.10-201ENST00000625130 1569 ntBASIC19.04■□□□□ 0.64
TOP3BO95985 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.04■□□□□ 0.64
TOP3BO95985 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
TOP3BO95985 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.04■□□□□ 0.64
TOP3BO95985 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
TOP3BO95985 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.04■□□□□ 0.64
TOP3BO95985 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.04■□□□□ 0.64
TOP3BO95985 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP3BO95985 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TOP3BO95985 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP3BO95985 AC090164.3-201ENST00000610780 2143 ntBASIC19.03■□□□□ 0.64
TOP3BO95985 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.03■□□□□ 0.64
TOP3BO95985 AC135050.7-201ENST00000624508 2218 ntBASIC19.03■□□□□ 0.64
TOP3BO95985 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.03■□□□□ 0.64
TOP3BO95985 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.03■□□□□ 0.64
TOP3BO95985 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 COX11P1-201ENST00000489116 835 ntBASIC19.03■□□□□ 0.64
TOP3BO95985 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.03■□□□□ 0.64
TOP3BO95985 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP3BO95985 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP3BO95985 AL691432.3-201ENST00000621860 400 ntBASIC19.03■□□□□ 0.64
TOP3BO95985 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP3BO95985 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP3BO95985 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.03■□□□□ 0.64
TOP3BO95985 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.03■□□□□ 0.64
TOP3BO95985 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TOP3BO95985 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP3BO95985 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP3BO95985 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.02■□□□□ 0.64
TOP3BO95985 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP3BO95985 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP3BO95985 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TOP3BO95985 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TOP3BO95985 AL390961.4-201ENST00000623958 2535 ntBASIC19.02■□□□□ 0.64
TOP3BO95985 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TOP3BO95985 Z98044.1-201ENST00000632503 1764 ntBASIC19.02■□□□□ 0.64
TOP3BO95985 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TOP3BO95985 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.02■□□□□ 0.64
TOP3BO95985 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.02■□□□□ 0.64
TOP3BO95985 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.02■□□□□ 0.64
TOP3BO95985 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.02■□□□□ 0.64
TOP3BO95985 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.02■□□□□ 0.64
TOP3BO95985 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.02■□□□□ 0.64
TOP3BO95985 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.02■□□□□ 0.64
TOP3BO95985 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.02■□□□□ 0.64
TOP3BO95985 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.02■□□□□ 0.63
TOP3BO95985 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TOP3BO95985 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TOP3BO95985 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP3BO95985 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TOP3BO95985 AC005332.1-201ENST00000577698 1310 ntBASIC19.01■□□□□ 0.63
TOP3BO95985 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.01■□□□□ 0.63
TOP3BO95985 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.01■□□□□ 0.63
TOP3BO95985 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP3BO95985 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.01■□□□□ 0.63
TOP3BO95985 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP3BO95985 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.01■□□□□ 0.63
TOP3BO95985 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.01■□□□□ 0.63
TOP3BO95985 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 SLC25A1P4-201ENST00000567977 778 ntBASIC19.01■□□□□ 0.63
TOP3BO95985 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.01■□□□□ 0.63
TOP3BO95985 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.01■□□□□ 0.63
TOP3BO95985 DGCR10-201ENST00000609839 495 ntBASIC19.01■□□□□ 0.63
TOP3BO95985 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.01■□□□□ 0.63
TOP3BO95985 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TOP3BO95985 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.01■□□□□ 0.63
TOP3BO95985 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TOP3BO95985 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.01■□□□□ 0.63
TOP3BO95985 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.01■□□□□ 0.63
TOP3BO95985 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19■□□□□ 0.63
TOP3BO95985 LETM1P2-201ENST00000597330 2178 ntBASIC19■□□□□ 0.63
TOP3BO95985 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19■□□□□ 0.63
TOP3BO95985 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TOP3BO95985 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TOP3BO95985 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TOP3BO95985 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TOP3BO95985 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms