Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KDELR3O43731 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KDELR3O43731 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.84■□□□□ 0.61
KDELR3O43731 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.84■□□□□ 0.61
KDELR3O43731 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KDELR3O43731 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KDELR3O43731 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.84■□□□□ 0.61
KDELR3O43731 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KDELR3O43731 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.84■□□□□ 0.61
KDELR3O43731 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KDELR3O43731 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KDELR3O43731 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 AC112907.2-201ENST00000448639 330 ntBASIC18.83■□□□□ 0.6
KDELR3O43731 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
KDELR3O43731 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.83■□□□□ 0.6
KDELR3O43731 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.83■□□□□ 0.6
KDELR3O43731 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
KDELR3O43731 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
KDELR3O43731 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
KDELR3O43731 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
KDELR3O43731 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.82■□□□□ 0.6
KDELR3O43731 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.82■□□□□ 0.6
KDELR3O43731 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.82■□□□□ 0.6
KDELR3O43731 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 HYMAI.1-201ENST00000620949 238 ntBASIC18.82■□□□□ 0.6
KDELR3O43731 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.82■□□□□ 0.6
KDELR3O43731 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KDELR3O43731 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.82■□□□□ 0.6
KDELR3O43731 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
KDELR3O43731 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.82■□□□□ 0.6
KDELR3O43731 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KDELR3O43731 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KDELR3O43731 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 AL138781.2-201ENST00000617896 1843 ntBASIC18.81■□□□□ 0.6
KDELR3O43731 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.81■□□□□ 0.6
KDELR3O43731 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KDELR3O43731 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KDELR3O43731 MIR149-201ENST00000384879 89 ntBASIC18.81■□□□□ 0.6
KDELR3O43731 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.81■□□□□ 0.6
KDELR3O43731 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.81■□□□□ 0.6
KDELR3O43731 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 KRT18P35-201ENST00000510488 1269 ntBASIC18.81■□□□□ 0.6
KDELR3O43731 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.81■□□□□ 0.6
KDELR3O43731 AC079602.3-201ENST00000623931 403 ntBASIC18.81■□□□□ 0.6
KDELR3O43731 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.81■□□□□ 0.6
KDELR3O43731 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
KDELR3O43731 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.81■□□□□ 0.6
KDELR3O43731 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.81■□□□□ 0.6
KDELR3O43731 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
KDELR3O43731 AC004408.2-201ENST00000623613 2777 ntBASIC18.81■□□□□ 0.6
KDELR3O43731 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
KDELR3O43731 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
KDELR3O43731 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.8■□□□□ 0.6
KDELR3O43731 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 PVRIG2P-201ENST00000435460 978 ntBASIC18.8■□□□□ 0.6
KDELR3O43731 AC092597.1-201ENST00000487352 616 ntBASIC18.8■□□□□ 0.6
KDELR3O43731 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.8■□□□□ 0.6
KDELR3O43731 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.8■□□□□ 0.6
KDELR3O43731 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.8■□□□□ 0.6
KDELR3O43731 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.8■□□□□ 0.6
KDELR3O43731 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.8■□□□□ 0.6
KDELR3O43731 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.8■□□□□ 0.6
KDELR3O43731 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.8■□□□□ 0.6
KDELR3O43731 AL445228.2-201ENST00000605589 952 ntBASIC18.8■□□□□ 0.6
KDELR3O43731 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KDELR3O43731 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms