Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 MYC-208ENST00000641036 567 ntBASIC17.79■□□□□ 0.44
NDUFS4O43181 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NDUFS4O43181 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NDUFS4O43181 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFS4O43181 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
NDUFS4O43181 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NDUFS4O43181 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NDUFS4O43181 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
NDUFS4O43181 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFS4O43181 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFS4O43181 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFS4O43181 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
NDUFS4O43181 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NDUFS4O43181 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.78■□□□□ 0.44
NDUFS4O43181 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.78■□□□□ 0.44
NDUFS4O43181 KRT18P57-201ENST00000443599 1254 ntBASIC17.78■□□□□ 0.44
NDUFS4O43181 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.78■□□□□ 0.44
NDUFS4O43181 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.78■□□□□ 0.44
NDUFS4O43181 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.78■□□□□ 0.44
NDUFS4O43181 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFS4O43181 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.78■□□□□ 0.44
NDUFS4O43181 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFS4O43181 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFS4O43181 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NDUFS4O43181 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFS4O43181 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFS4O43181 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFS4O43181 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFS4O43181 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFS4O43181 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NDUFS4O43181 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFS4O43181 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFS4O43181 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.77■□□□□ 0.44
NDUFS4O43181 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.77■□□□□ 0.44
NDUFS4O43181 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.77■□□□□ 0.44
NDUFS4O43181 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NDUFS4O43181 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NDUFS4O43181 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.77■□□□□ 0.44
NDUFS4O43181 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 AC141257.4-201ENST00000634557 245 ntBASIC17.77■□□□□ 0.44
NDUFS4O43181 AC136944.6-201ENST00000634818 245 ntBASIC17.77■□□□□ 0.44
NDUFS4O43181 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 AC112777.1-201ENST00000540175 1423 ntBASIC17.77■□□□□ 0.44
NDUFS4O43181 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NDUFS4O43181 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFS4O43181 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.77■□□□□ 0.44
NDUFS4O43181 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDUFS4O43181 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDUFS4O43181 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.77■□□□□ 0.43
NDUFS4O43181 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
NDUFS4O43181 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.77■□□□□ 0.43
NDUFS4O43181 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDUFS4O43181 AC126763.1-201ENST00000552015 2118 ntBASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms